RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 MKL1Q969V6 931 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 FERMT2Q96AC1 680 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 ZNF70Q9UC06 446 aaPredicted RBP18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 SEC63Q9UGP8 760 aaKnown RBP18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 TCP10L2B9ZVM9 353 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 BIN1O00499 593 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 FOXN1O15353 648 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 POLR2DO15514 142 aaKnown RBP18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 MCM7P33993 719 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 CXCL9Q07325 125 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 RRP1BQ14684 758 aaKnown RBP18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 SEPT2Q15019 361 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 DLGAP5Q15398 846 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 IL17AQ16552 155 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 DHX40Q8IX18 779 aaKnown RBP18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 ELOA2Q8IYF1 753 aaPredicted RBP18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 CNNM3Q8NE01 707 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 TRIM34Q9BYJ4 488 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 NYAP2Q9P242 653 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 HDAC9Q9UKV0 1011 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 SMCO2A6NFE2 343 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 GDF11O95390 407 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 NLRP12P59046 1061 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 EPSTI1Q96J88 318 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 KANSL2Q9H9L4 492 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 JMJD4Q9H9V9 463 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 CNTNAP1P78357 1384 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 A0A087X0B3 334 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 CCDC194A0A1B0GVG4 234 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 R3HDM1Q15032 1099 aaKnown RBP18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 PPP4R3BQ5MIZ7 849 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 ADGRF4Q8IZF3 695 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 CSRNP1Q96S65 589 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 SGIP1Q9BQI5 828 aa18.22■□□□□ 0.51
DEPDC7-202ENST00000311388 NFKBIEO00221 500 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 ACTN4O43707 911 aaKnown RBP18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 INF2Q27J81 1249 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 ABCB5Q2M3G0 1257 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 KCTD1Q719H9 257 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 CEP57L1Q8IYX8 460 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 OGFOD1Q8N543 542 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 PDILTQ8N807 584 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 AGBL3Q8NEM8 1001 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 CCDC12Q8WUD4 166 aaPredicted RBP18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 SYMPKQ92797 1274 aaKnown RBP18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 CCDC39Q9UFE4 941 aa18.21■□□□□ 0.51
DEPDC7-202ENST00000311388 VWA3AA6NCI4 1184 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 PPP1R11O60927 126 aaPredicted RBP18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 SLC16A2P36021 539 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 CCDC96Q2M329 555 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 GPATCH4Q5T3I0 446 aaKnown RBP18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 TMEM179Q6ZVK1 233 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 MTMR14Q8NCE2 650 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 COA7Q96BR5 231 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 C6orf50Q9HD87 102 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 TMOD2Q9NZR1 351 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 ESYT2A0FGR8 921 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 ISM2Q6H9L7 571 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 ZSCAN30Q86W11 494 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 FAM151AQ8WW52 585 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 MTMR8Q96EF0 704 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 TAOK3Q9H2K8 898 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 PPP1R1BQ9UD71 204 aaPredicted RBP18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 PCDHA5Q9Y5H7 936 aa18.2■□□□□ 0.5
DEPDC7-202ENST00000311388 hCG_1984214I3L0E3 225 aa18.19■□□□□ 0.5
DEPDC7-202ENST00000311388 PRR29P0C7W0 189 aa18.19■□□□□ 0.5
DEPDC7-202ENST00000311388 GNA11P29992 359 aa18.19■□□□□ 0.5
DEPDC7-202ENST00000311388 ICA1Q05084 483 aa18.19■□□□□ 0.5
DEPDC7-202ENST00000311388 AOPEPQ8N6M6 819 aa18.19■□□□□ 0.5
DEPDC7-202ENST00000311388 ZNF713Q8N859 430 aaPredicted RBP18.19■□□□□ 0.5
DEPDC7-202ENST00000311388 ZBED3Q96IU2 234 aaPredicted RBP18.19■□□□□ 0.5
DEPDC7-202ENST00000311388 BPIFA3Q9BQP9 254 aa18.19■□□□□ 0.5
DEPDC7-202ENST00000311388 ARFGEF1Q9Y6D6 1849 aa18.19■□□□□ 0.5
DEPDC7-202ENST00000311388 PNMA6FA0A0J9YX94 578 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 USP17L10C9JJH3 530 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 GH2P01242 217 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 KRT25Q7Z3Z0 450 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 GRAMD1CQ8IYS0 662 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 SHTN1A0MZ66 631 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 POSTNQ15063 836 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 ZRSR1Q15695 479 aaKnown RBP18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 ARL6IP4Q66PJ3 421 aaKnown RBP18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 SLFN13Q68D06 897 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 PLA2G4DQ86XP0 818 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 CDAN1Q8IWY9 1227 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 DCAF4Q8WV16 495 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 NAT10Q9H0A0 1025 aaKnown RBP18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 TMEM60Q9H2L4 133 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 TMEM260Q9NX78 707 aa18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 HERC5Q9UII4 1024 aaKnown RBP18.18■□□□□ 0.5
DEPDC7-202ENST00000311388 GOLGA6L19H0YKK7 550 aa18.17■□□□□ 0.5
DEPDC7-202ENST00000311388 PTMAP06454 111 aaKnown RBP18.17■□□□□ 0.5
DEPDC7-202ENST00000311388 RBM26Q5T8P6 1007 aaKnown RBP18.17■□□□□ 0.5
DEPDC7-202ENST00000311388 CIAPIN1Q6FI81 312 aa18.17■□□□□ 0.5
DEPDC7-202ENST00000311388 DHX58Q96C10 678 aa18.17■□□□□ 0.5
DEPDC7-202ENST00000311388 BIN2Q9UBW5 565 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms