RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 MAGEC2Q9UBF1 373 aaPredicted RBP16.44■□□□□ 0.22
COL6A2-202ENST00000310645 IRF2BP1Q8IU81 584 aa16.43■□□□□ 0.22
COL6A2-202ENST00000310645 IQSEC3Q9UPP2 1182 aaPredicted RBP16.43■□□□□ 0.22
COL6A2-202ENST00000310645 TNKSO95271 1327 aa16.43■□□□□ 0.22
COL6A2-202ENST00000310645 ZNF658Q5TYW1 1059 aaPredicted RBP16.43■□□□□ 0.22
COL6A2-202ENST00000310645 CCDC91Q7Z6B0 441 aa16.43■□□□□ 0.22
COL6A2-202ENST00000310645 SUGP1Q8IWZ8 645 aaKnown RBP16.43■□□□□ 0.22
COL6A2-202ENST00000310645 NHEJ1Q9H9Q4 299 aaPredicted RBP16.43■□□□□ 0.22
COL6A2-202ENST00000310645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL6A2-202ENST00000310645 RGPD5Q99666 1765 aa16.43■□□□□ 0.22
COL6A2-202ENST00000310645 EIF3HO15372 352 aaKnown RBP eCLIP16.42■□□□□ 0.22
COL6A2-202ENST00000310645 GTPBP6O43824 516 aaPredicted RBP16.42■□□□□ 0.22
COL6A2-202ENST00000310645 SHOX2O60902 331 aaPredicted RBP16.42■□□□□ 0.22
COL6A2-202ENST00000310645 KIF5AQ12840 1032 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 EHBP1Q8NDI1 1231 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 SDR42E1Q8WUS8 393 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 RPGRIP1Q96KN7 1286 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 LRWD1Q9UFC0 647 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 PDE8BO95263 885 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 PKN1Q16512 942 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 SPATA5Q8NB90 893 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 ALX1Q15699 326 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 TMTC2Q8N394 836 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 SECISBP2LQ93073 1101 aaKnown RBP16.42■□□□□ 0.22
COL6A2-202ENST00000310645 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
COL6A2-202ENST00000310645 LGALS16A8MUM7 142 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 H7C1D1 291 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 MYO1FO00160 1098 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 KIAA0754O94854 1291 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 PCCAP05165 728 aaPredicted RBP16.41■□□□□ 0.22
COL6A2-202ENST00000310645 STAT6P42226 847 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 TBC1D8BQ0IIM8 1120 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 CCDC181Q5TID7 509 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 ANKRD13CQ8N6S4 541 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 PHF20Q9BVI0 1012 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 RNF26Q9BY78 433 aaPredicted RBP16.41■□□□□ 0.22
COL6A2-202ENST00000310645 MLXIPQ9HAP2 919 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 SLIT3O75094 1523 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 ECM29Q5VYK3 1845 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 IQCEQ6IPM2 695 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 PDXDC2PQ6P474 469 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 OTUD6BQ8N6M0 293 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 TSEN2Q8NCE0 465 aaKnown RBP16.41■□□□□ 0.22
COL6A2-202ENST00000310645 DNAJC7Q99615 494 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 CAPN11Q9UMQ6 739 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 MYO5AQ9Y4I1 1855 aaKnown RBP16.41■□□□□ 0.22
COL6A2-202ENST00000310645 PLEKP08567 350 aaPredicted RBP16.41■□□□□ 0.22
COL6A2-202ENST00000310645 KCNV1Q6PIU1 500 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
COL6A2-202ENST00000310645 AENQ8WTP8 325 aaKnown RBP16.41■□□□□ 0.22
COL6A2-202ENST00000310645 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
COL6A2-202ENST00000310645 CSF1RP07333 972 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 NLRP5P59047 1200 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 RASGRF1Q13972 1273 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 SPA17Q15506 151 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 RNF187Q5TA31 235 aaPredicted RBP16.4■□□□□ 0.22
COL6A2-202ENST00000310645 CCDC42Q96M95 316 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 RIC1Q4ADV7 1423 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 OPA1O60313 960 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 HSF2BPO75031 334 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 ZPR1O75312 459 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 MOCS3O95396 460 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 UQCRFS1P1P0C7P4 283 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 ERCC3P19447 782 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 NFRKBQ6P4R8 1299 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 STAG1Q8WVM7 1258 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 LRP2BPQ9P2M1 347 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 TMEM94Q12767 1356 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 ABCC12Q96J65 1359 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 GRIN2DO15399 1336 aa16.4■□□□□ 0.22
COL6A2-202ENST00000310645 PP2D1A8MPX8 630 aa16.39■□□□□ 0.22
COL6A2-202ENST00000310645 KRT14P02533 472 aa16.39■□□□□ 0.22
COL6A2-202ENST00000310645 MAP2K2P36507 400 aa16.39■□□□□ 0.22
COL6A2-202ENST00000310645 IL17AQ16552 155 aa16.39■□□□□ 0.22
COL6A2-202ENST00000310645 BMP15O95972 392 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 NAP1L1P55209 391 aaKnown RBP16.39■□□□□ 0.21
COL6A2-202ENST00000310645 TYW1BQ6NUM6 668 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 AMOTL1Q8IY63 956 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 JPH2Q9BR39 696 aaPredicted RBP16.39■□□□□ 0.21
COL6A2-202ENST00000310645 CAPN6Q9Y6Q1 641 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 GOLGA8KD6RF30 607 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 ADAMTS3O15072 1205 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 NCK2O43639 380 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.21
COL6A2-202ENST00000310645 ATP2C1P98194 919 aaPredicted RBP16.39■□□□□ 0.21
COL6A2-202ENST00000310645 HLFQ16534 295 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 TTMPQ5BVD1 217 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
COL6A2-202ENST00000310645 SPATA4Q8NEY3 305 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 IFT81Q8WYA0 676 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 TUBGCP2Q9BSJ2 902 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 CENPHQ9H3R5 247 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 ABCF2Q9UG63 623 aa16.39■□□□□ 0.21
COL6A2-202ENST00000310645 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
COL6A2-202ENST00000310645 VEGFAP15692 232 aaPredicted RBP16.38■□□□□ 0.21
COL6A2-202ENST00000310645 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms