RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 SGMS1Q86VZ5 419 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 REPS2Q8NFH8 660 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 BRF1Q92994 677 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 IL17RAQ96F46 866 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 TM6SF1Q9BZW5 370 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 MAD2L2Q9UI95 211 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 PRR12Q9ULL5 1215 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 BAZ2BQ9UIF8 2168 aaKnown RBP10.63□□□□□ -0.71
PDE4D-201ENST00000309641 WDR19Q8NEZ3 1342 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 SMCHD1A6NHR9 2005 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 FKTNO75072 461 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 GCLCP48506 637 aaPredicted RBP10.63□□□□□ -0.71
PDE4D-201ENST00000309641 ERVK-9P63128 1117 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 ERVK-24P63145 666 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 FAM110CQ1W6H9 321 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 APOA5Q6Q788 366 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 CMTR1Q8N1G2 835 aaKnown RBP10.63□□□□□ -0.71
PDE4D-201ENST00000309641 PRPF38AQ8NAV1 312 aaKnown RBP10.63□□□□□ -0.71
PDE4D-201ENST00000309641 MTA3Q9BTC8 594 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 AGXT2Q9BYV1 514 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 MORF4L1Q9UBU8 362 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 FEM1BQ9UK73 627 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 ZNF214Q9UL59 606 aaPredicted RBP10.63□□□□□ -0.71
PDE4D-201ENST00000309641 RABGAP1Q9Y3P9 1069 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 CYP46A1Q9Y6A2 500 aa10.63□□□□□ -0.71
PDE4D-201ENST00000309641 A0A0G2JMZ2 1700 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 DOCK3Q8IZD9 2030 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 PARP1P09874 1014 aaKnown RBP10.62□□□□□ -0.71
PDE4D-201ENST00000309641 RBM25P49756 843 aaKnown RBP10.62□□□□□ -0.71
PDE4D-201ENST00000309641 LACTBP83111 547 aaPredicted RBP10.62□□□□□ -0.71
PDE4D-201ENST00000309641 PLS1Q14651 629 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 GRM4Q14833 912 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 BTNL9Q6UXG8 535 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 CATIPQ7Z7H3 387 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 MICU3Q86XE3 530 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 CPXCR1Q8N123 301 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 TRIM47Q96LD4 638 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 EFCC1Q9HA90 598 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 RIPK3Q9Y572 518 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 MYPNQ86TC9 1320 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 KLF18A0A0U1RQI7 1052 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 PALM3A6NDB9 673 aaPredicted RBP10.62□□□□□ -0.71
PDE4D-201ENST00000309641 KLRF2D3W0D1 207 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 PLA2G6O60733 806 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 PLEKHA8P1O95397 391 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 SLC4A3P48751 1232 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 FGD1P98174 961 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 NOM1Q5C9Z4 860 aaKnown RBP10.62□□□□□ -0.71
PDE4D-201ENST00000309641 GPATCH4Q5T3I0 446 aaKnown RBP10.62□□□□□ -0.71
PDE4D-201ENST00000309641 SYDE2Q5VT97 1194 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 TMTC2Q8N394 836 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 GPRC5AQ8NFJ5 357 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 CHURC1Q8WUH1 139 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 MOV10L1Q9BXT6 1211 aaKnown RBP10.62□□□□□ -0.71
PDE4D-201ENST00000309641 SLC38A10Q9HBR0 1119 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 RAVER2Q9HCJ3 691 aaKnown RBP10.62□□□□□ -0.71
PDE4D-201ENST00000309641 VAT1LQ9HCJ6 419 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 PDRG1Q9NUG6 133 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 SLC12A7Q9Y666 1083 aa10.62□□□□□ -0.71
PDE4D-201ENST00000309641 ZNF536O15090 1300 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 CYTH3O43739 400 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 EIF5BO60841 1220 aaKnown RBP10.61□□□□□ -0.71
PDE4D-201ENST00000309641 DTNBO60941 627 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 PSMC4P43686 418 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 NEK4P51957 841 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 ASPRV1Q53RT3 343 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 CCDC174Q6PII3 467 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 FAM160B2Q86V87 743 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 ADGRF4Q8IZF3 695 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 AGBL1Q96MI9 1066 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 TBC1D32Q96NH3 1257 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 SPATC1LQ9H0A9 340 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 FAM217BQ9NTX9 383 aaPredicted RBP10.61□□□□□ -0.71
PDE4D-201ENST00000309641 NAP1L2Q9ULW6 460 aaPredicted RBP10.61□□□□□ -0.71
PDE4D-201ENST00000309641 HPS5Q9UPZ3 1129 aa10.61□□□□□ -0.71
PDE4D-201ENST00000309641 DDAH1O94760 285 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 CDC27P30260 824 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 AK2P54819 239 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 NOL8Q76FK4 1167 aaKnown RBP10.6□□□□□ -0.71
PDE4D-201ENST00000309641 FBXL16Q8N461 479 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 CCDC82Q8N4S0 544 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 PIBF1Q8WXW3 757 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 PPFIA3O75145 1194 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 ERCC3P19447 782 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 STAT3P40763 770 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 SNRNP48Q6IEG0 339 aaKnown RBP10.6□□□□□ -0.71
PDE4D-201ENST00000309641 SRBD1Q8N5C6 995 aaKnown RBP10.6□□□□□ -0.71
PDE4D-201ENST00000309641 MB21D1Q8N884 522 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 FANCBQ8NB91 859 aa10.6□□□□□ -0.71
PDE4D-201ENST00000309641 RANBP17Q9H2T7 1088 aaKnown RBP10.6□□□□□ -0.71
PDE4D-201ENST00000309641 NCOA5Q9HCD5 579 aaKnown RBP10.6□□□□□ -0.71
PDE4D-201ENST00000309641 hCG_1642624A0A1W2PR95 340 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 GOLGA8BA8MQT2 603 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 ZBTB43O43298 467 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 ZBED4O75132 1171 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 FMNL1O95466 1100 aaPredicted RBP10.59□□□□□ -0.71
PDE4D-201ENST00000309641 PDIA3P30101 505 aaKnown RBP10.59□□□□□ -0.71
PDE4D-201ENST00000309641 ADD1P35611 737 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms