RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 NAT10Q9H0A0 1025 aaKnown RBP24.27■■□□□ 1.48
ATG4D-201ENST00000309469 C6orf50Q9HD87 102 aa24.27■■□□□ 1.48
ATG4D-201ENST00000309469 NYAP2Q9P242 653 aa24.27■■□□□ 1.48
ATG4D-201ENST00000309469 CCDC39Q9UFE4 941 aa24.27■■□□□ 1.48
ATG4D-201ENST00000309469 SMCO2A6NFE2 343 aa24.27■■□□□ 1.48
ATG4D-201ENST00000309469 POLR2DO15514 142 aaKnown RBP24.27■■□□□ 1.48
ATG4D-201ENST00000309469 EEF2P13639 858 aaKnown RBP24.27■■□□□ 1.48
ATG4D-201ENST00000309469 MCM7P33993 719 aa24.27■■□□□ 1.48
ATG4D-201ENST00000309469 USP49Q70CQ1 688 aa24.27■■□□□ 1.48
ATG4D-201ENST00000309469 AGBL3Q8NEM8 1001 aa24.27■■□□□ 1.48
ATG4D-201ENST00000309469 ZNF70Q9UC06 446 aaPredicted RBP24.27■■□□□ 1.48
ATG4D-201ENST00000309469 TUBE1Q9UJT0 475 aa24.27■■□□□ 1.48
ATG4D-201ENST00000309469 hCG_1984214I3L0E3 225 aa24.26■■□□□ 1.47
ATG4D-201ENST00000309469 GNA11P29992 359 aa24.26■■□□□ 1.47
ATG4D-201ENST00000309469 NLRP12P59046 1061 aa24.26■■□□□ 1.47
ATG4D-201ENST00000309469 SHROOM1Q2M3G4 852 aaPredicted RBP24.26■■□□□ 1.47
ATG4D-201ENST00000309469 GPATCH4Q5T3I0 446 aaKnown RBP24.26■■□□□ 1.47
ATG4D-201ENST00000309469 TMEM179Q6ZVK1 233 aa24.26■■□□□ 1.47
ATG4D-201ENST00000309469 ZSCAN30Q86W11 494 aa24.26■■□□□ 1.47
ATG4D-201ENST00000309469 ZNF713Q8N859 430 aaPredicted RBP24.26■■□□□ 1.47
ATG4D-201ENST00000309469 TCP10L2B9ZVM9 353 aa24.25■■□□□ 1.47
ATG4D-201ENST00000309469 CSRNP1Q96S65 589 aa24.25■■□□□ 1.47
ATG4D-201ENST00000309469 CLRN2A0PK11 232 aa24.25■■□□□ 1.47
ATG4D-201ENST00000309469 GOLGA6L19H0YKK7 550 aa24.25■■□□□ 1.47
ATG4D-201ENST00000309469 CXCL9Q07325 125 aa24.25■■□□□ 1.47
ATG4D-201ENST00000309469 PNOCQ13519 176 aa24.25■■□□□ 1.47
ATG4D-201ENST00000309469 SEPT2Q15019 361 aa24.25■■□□□ 1.47
ATG4D-201ENST00000309469 CCDC96Q2M329 555 aa24.25■■□□□ 1.47
ATG4D-201ENST00000309469 ABCB5Q2M3G0 1257 aa24.25■■□□□ 1.47
ATG4D-201ENST00000309469 HOOK1Q9UJC3 728 aaKnown RBP24.25■■□□□ 1.47
ATG4D-201ENST00000309469 ESYT2A0FGR8 921 aa24.24■■□□□ 1.47
ATG4D-201ENST00000309469 BIN1O00499 593 aa24.24■■□□□ 1.47
ATG4D-201ENST00000309469 CLCN1P35523 988 aa24.24■■□□□ 1.47
ATG4D-201ENST00000309469 MDM2Q00987 491 aaPredicted RBP24.24■■□□□ 1.47
ATG4D-201ENST00000309469 DPCR1Q3MIW9 517 aa24.24■■□□□ 1.47
ATG4D-201ENST00000309469 TTBK2Q6IQ55 1244 aa24.24■■□□□ 1.47
ATG4D-201ENST00000309469 SIAH1Q8IUQ4 282 aa24.24■■□□□ 1.47
ATG4D-201ENST00000309469 TAOK3Q9H2K8 898 aa24.24■■□□□ 1.47
ATG4D-201ENST00000309469 JMJD4Q9H9V9 463 aa24.24■■□□□ 1.47
ATG4D-201ENST00000309469 PPP1R1BQ9UD71 204 aaPredicted RBP24.24■■□□□ 1.47
ATG4D-201ENST00000309469 SERTAD1Q9UHV2 236 aa24.24■■□□□ 1.47
ATG4D-201ENST00000309469 VWA3AA6NCI4 1184 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 GDF11O95390 407 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 PTMAP06454 111 aaKnown RBP24.23■■□□□ 1.47
ATG4D-201ENST00000309469 SPDYE2Q495Y8 402 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 KRT25Q7Z3Z0 450 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 DHX40Q8IX18 779 aaKnown RBP24.23■■□□□ 1.47
ATG4D-201ENST00000309469 ADGRF4Q8IZF3 695 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 C4orf32Q8N8J7 132 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 FAM151AQ8WW52 585 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 EPSTI1Q96J88 318 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 BECN2A8MW95 431 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 R3HDM1Q15032 1099 aaKnown RBP24.23■■□□□ 1.47
ATG4D-201ENST00000309469 INF2Q27J81 1249 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 ARL6IP4Q66PJ3 421 aaKnown RBP24.23■■□□□ 1.47
ATG4D-201ENST00000309469 MTMR14Q8NCE2 650 aa24.23■■□□□ 1.47
ATG4D-201ENST00000309469 SYMPKQ92797 1274 aaKnown RBP24.23■■□□□ 1.47
ATG4D-201ENST00000309469 HERC5Q9UII4 1024 aaKnown RBP24.23■■□□□ 1.47
ATG4D-201ENST00000309469 PNMA6FA0A0J9YX94 578 aa24.22■■□□□ 1.47
ATG4D-201ENST00000309469 ICA1Q05084 483 aa24.22■■□□□ 1.47
ATG4D-201ENST00000309469 RBM26Q5T8P6 1007 aaKnown RBP24.22■■□□□ 1.47
ATG4D-201ENST00000309469 KANK3Q6NY19 840 aa24.22■■□□□ 1.47
ATG4D-201ENST00000309469 KCTD1Q719H9 257 aa24.22■■□□□ 1.47
ATG4D-201ENST00000309469 PDILTQ8N807 584 aa24.22■■□□□ 1.47
ATG4D-201ENST00000309469 BPIFA3Q9BQP9 254 aa24.22■■□□□ 1.47
ATG4D-201ENST00000309469 ACTN4O43707 911 aaKnown RBP24.22■■□□□ 1.47
ATG4D-201ENST00000309469 IL17AQ16552 155 aa24.22■■□□□ 1.47
ATG4D-201ENST00000309469 DCAF4Q8WV16 495 aa24.22■■□□□ 1.47
ATG4D-201ENST00000309469 JDP2Q8WYK2 163 aa24.22■■□□□ 1.47
ATG4D-201ENST00000309469 FOXN1O15353 648 aa24.21■■□□□ 1.47
ATG4D-201ENST00000309469 FKBP1CQ5VVH2 108 aa24.21■■□□□ 1.47
ATG4D-201ENST00000309469 SLFN13Q68D06 897 aa24.21■■□□□ 1.47
ATG4D-201ENST00000309469 CIAPIN1Q6FI81 312 aa24.21■■□□□ 1.47
ATG4D-201ENST00000309469 COA7Q96BR5 231 aa24.21■■□□□ 1.47
ATG4D-201ENST00000309469 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.21■■□□□ 1.47
ATG4D-201ENST00000309469 PCDHA5Q9Y5H7 936 aa24.21■■□□□ 1.47
ATG4D-201ENST00000309469 MSNP26038 577 aaKnown RBP24.2■■□□□ 1.46
ATG4D-201ENST00000309469 SLC16A2P36021 539 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 JAG1P78504 1218 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 RRP1BQ14684 758 aaKnown RBP24.2■■□□□ 1.46
ATG4D-201ENST00000309469 POSTNQ15063 836 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 NONOQ15233 471 aaKnown RBP eCLIP24.2■■□□□ 1.46
ATG4D-201ENST00000309469 CD2APQ9Y5K6 639 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 CNTNAP1P78357 1384 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 NFKBIEO00221 500 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 GH2P01242 217 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 SLC1A4P43007 532 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 ISM2Q6H9L7 571 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 AOPEPQ8N6M6 819 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 MTMR8Q96EF0 704 aa24.2■■□□□ 1.46
ATG4D-201ENST00000309469 A0A087X0B3 334 aa24.19■■□□□ 1.46
ATG4D-201ENST00000309469 USP17L10C9JJH3 530 aa24.19■■□□□ 1.46
ATG4D-201ENST00000309469 RAD21O60216 631 aa24.19■■□□□ 1.46
ATG4D-201ENST00000309469 REXO1Q8N1G1 1221 aaKnown RBP24.19■■□□□ 1.46
ATG4D-201ENST00000309469 DHX58Q96C10 678 aa24.19■■□□□ 1.46
ATG4D-201ENST00000309469 SGIP1Q9BQI5 828 aa24.19■■□□□ 1.46
ATG4D-201ENST00000309469 VEZTQ9HBM0 779 aa24.19■■□□□ 1.46
ATG4D-201ENST00000309469 ZBTB5O15062 677 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 PPP1R18Q6NYC8 613 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 GMCL1P1Q8NEA9 526 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms