RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 POTEB2H3BUK9 544 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 RNF113AO15541 343 aaKnown RBP14.57□□□□□ -0.08
TPT1-201ENST00000309246 GPAA1O43292 621 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 NDUFB10O96000 172 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 COPB2P35606 906 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 SHHQ15465 462 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 C9orf50Q5SZB4 431 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 SNRNP48Q6IEG0 339 aaKnown RBP14.57□□□□□ -0.08
TPT1-201ENST00000309246 GPATCH3Q96I76 525 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 GUCD1Q96NT3 240 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 NYAP2Q9P242 653 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 PHF24Q9UPV7 400 aa14.57□□□□□ -0.08
TPT1-201ENST00000309246 DIS3Q9Y2L1 958 aaKnown RBP14.57□□□□□ -0.08
TPT1-201ENST00000309246 TRIM43BA6NCK2 446 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 F5H6K3 240 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 M0R2C6 588 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 PRDM1O75626 825 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 ZNF865P0CJ78 1059 aaPredicted RBP14.56□□□□□ -0.08
TPT1-201ENST00000309246 SLC4A3P48751 1232 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 TDO2P48775 406 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 TLE2Q04725 743 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 KLRC3Q07444 240 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 FAM109BQ6ICB4 259 aaPredicted RBP14.56□□□□□ -0.08
TPT1-201ENST00000309246 GIMAP6Q6P9H5 292 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 RNF180Q86T96 592 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 TRIM43Q96BQ3 446 aaPredicted RBP14.56□□□□□ -0.08
TPT1-201ENST00000309246 TEX13BQ9BXU2 312 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 CLIP2Q9UDT6 1046 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 CNPY2Q9Y2B0 182 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 RIPK3Q9Y572 518 aa14.56□□□□□ -0.08
TPT1-201ENST00000309246 IGKV6D-41A0A0C4DH26 115 aa14.55□□□□□ -0.08
TPT1-201ENST00000309246 AKR1A1P14550 325 aa14.55□□□□□ -0.08
TPT1-201ENST00000309246 C1orf53Q5VUE5 145 aa14.55□□□□□ -0.08
TPT1-201ENST00000309246 CPXCR1Q8N123 301 aa14.55□□□□□ -0.08
TPT1-201ENST00000309246 DDX11Q96FC9 970 aa14.55□□□□□ -0.08
TPT1-201ENST00000309246 DCTPP1Q9H773 170 aa14.55□□□□□ -0.08
TPT1-201ENST00000309246 A0A1W2PQ45 241 aaPredicted RBP14.54□□□□□ -0.08
TPT1-201ENST00000309246 A0A1W2PQY0 241 aa14.54□□□□□ -0.08
TPT1-201ENST00000309246 ADAMTS4O75173 837 aa14.54□□□□□ -0.08
TPT1-201ENST00000309246 APPP05067 770 aa14.54□□□□□ -0.08
TPT1-201ENST00000309246 ZFYP08048 801 aaPredicted RBP14.54□□□□□ -0.08
TPT1-201ENST00000309246 ZNF697Q5TEC3 545 aa14.54□□□□□ -0.08
TPT1-201ENST00000309246 LRRC47Q8N1G4 583 aaKnown RBP14.54□□□□□ -0.08
TPT1-201ENST00000309246 PRPF38AQ8NAV1 312 aaKnown RBP14.54□□□□□ -0.08
TPT1-201ENST00000309246 KIFC2Q96AC6 838 aa14.54□□□□□ -0.08
TPT1-201ENST00000309246 CEP95Q96GE4 821 aa14.54□□□□□ -0.08
TPT1-201ENST00000309246 RAVER2Q9HCJ3 691 aaKnown RBP14.54□□□□□ -0.08
TPT1-201ENST00000309246 ZHX1Q9UKY1 873 aaPredicted RBP14.54□□□□□ -0.08
TPT1-201ENST00000309246 CTDP1Q9Y5B0 961 aaPredicted RBP14.54□□□□□ -0.08
TPT1-201ENST00000309246 LRRC37A2A6NM11 1700 aa14.53□□□□□ -0.08
TPT1-201ENST00000309246 SYNRGQ9UMZ2 1314 aa14.53□□□□□ -0.08
TPT1-201ENST00000309246 DNAJC25-GNG10A0A024R161 153 aa14.53□□□□□ -0.08
TPT1-201ENST00000309246 PQBP1O60828 265 aaKnown RBP14.53□□□□□ -0.08
TPT1-201ENST00000309246 ZBED4O75132 1171 aa14.53□□□□□ -0.08
TPT1-201ENST00000309246 SNAI1O95863 264 aaPredicted RBP14.53□□□□□ -0.08
TPT1-201ENST00000309246 CLTBP09497 229 aa14.53□□□□□ -0.08
TPT1-201ENST00000309246 GNAT2P19087 354 aa14.53□□□□□ -0.08
TPT1-201ENST00000309246 ITGB8P26012 769 aa14.53□□□□□ -0.08
TPT1-201ENST00000309246 IFNL3Q8IZI9 196 aa14.53□□□□□ -0.08
TPT1-201ENST00000309246 ZNF444Q8N0Y2 327 aaPredicted RBP14.53□□□□□ -0.08
TPT1-201ENST00000309246 SEC62Q99442 399 aaKnown RBP14.53□□□□□ -0.08
TPT1-201ENST00000309246 COL6A3P12111 3177 aa14.53□□□□□ -0.08
TPT1-201ENST00000309246 PLIN4Q96Q06 1357 aa14.52□□□□□ -0.08
TPT1-201ENST00000309246 SYNGAP1Q96PV0 1343 aa14.52□□□□□ -0.08
TPT1-201ENST00000309246 ATP2A1O14983 1001 aa14.52□□□□□ -0.09
TPT1-201ENST00000309246 MSL3Q8N5Y2 521 aaKnown RBP14.52□□□□□ -0.09
TPT1-201ENST00000309246 ZNF287Q9HBT7 754 aa14.52□□□□□ -0.09
TPT1-201ENST00000309246 MTMR4Q9NYA4 1195 aa14.52□□□□□ -0.09
TPT1-201ENST00000309246 FEM1BQ9UK73 627 aa14.52□□□□□ -0.09
TPT1-201ENST00000309246 FAM184BQ9ULE4 1060 aa14.52□□□□□ -0.09
TPT1-201ENST00000309246 TACC3Q9Y6A5 838 aa14.52□□□□□ -0.09
TPT1-201ENST00000309246 LCTP09848 1927 aa14.52□□□□□ -0.09
TPT1-201ENST00000309246 MYADML2A6NDP7 307 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 PATL2C9JE40 543 aaKnown RBP14.51□□□□□ -0.09
TPT1-201ENST00000309246 TTLL1O95922 423 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 RAG1P15918 1043 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 ACLYP53396 1101 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 EPHB4P54760 987 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 IRX5P78411 483 aaPredicted RBP14.51□□□□□ -0.09
TPT1-201ENST00000309246 MAMDC4Q6UXC1 1216 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 OTUD7AQ8TE49 926 aaPredicted RBP14.51□□□□□ -0.09
TPT1-201ENST00000309246 MKL1Q969V6 931 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 FGD4Q96M96 766 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 SLC38A10Q9HBR0 1119 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 STARD7Q9NQZ5 370 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
TPT1-201ENST00000309246 DNAH12Q6ZR08 3092 aa14.51□□□□□ -0.09
TPT1-201ENST00000309246 TTC41PQ6P2S7 1318 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 KIAA0355O15063 1070 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 ADCY6O43306 1168 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 TSPY3P0CV98 308 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 TSPY8P0CW00 308 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 KCNA10Q16322 511 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 LRRFIP1Q32MZ4 808 aaKnown RBP14.5□□□□□ -0.09
TPT1-201ENST00000309246 SLFN13Q68D06 897 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 ZNF467Q7Z7K2 595 aaPredicted RBP14.5□□□□□ -0.09
TPT1-201ENST00000309246 ANKRD35Q8N283 1001 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 GMCL1P1Q8NEA9 526 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 KLHDC9Q8NEP7 349 aa14.5□□□□□ -0.09
TPT1-201ENST00000309246 NEDD1Q8NHV4 660 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms