RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 MST1RQ04912 1400 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 GSTTP1A0A1W2PQM5 241 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 KCNJ18B7U540 433 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 LAD1O00515 517 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 SLFN14P0C7P3 912 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 CDK8P49336 464 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 KCNJ12Q14500 433 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 CD209Q9NNX6 404 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 HOMER2Q9NSB8 354 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 SRPRBQ9Y5M8 271 aaKnown RBP12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 GOLGA6L10A0A0M3HER8 536 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 TMEM232C9JQI7 657 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 H7C1D1 291 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 IKBKBO14920 756 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 CALUO43852 315 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 ZBED4O75132 1171 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 EVCP57679 992 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 SH3RF3Q8TEJ3 882 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 TSGA10Q9BZW7 698 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 DDX25Q9UHL0 483 aaKnown RBP12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 NRBP1Q9UHY1 535 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 RXRBP28702 533 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 TMTC3Q6ZXV5 915 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 GJD4Q96KN9 370 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 PLVAPQ9BX97 442 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 FER1L4A9Z1Z3 1794 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 STK36Q9NRP7 1315 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 ERCC5P28715 1186 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 VWA3BQ502W6 1294 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 ENAHQ8N8S7 591 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 PIGSQ96S52 555 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 NAPGQ99747 312 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 IMPG2Q9BZV3 1241 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 KANSL2Q9H9L4 492 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 PNPLA7Q6ZV29 1317 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 CDC27P30260 824 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 KIAA0753Q2KHM9 967 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 SGMS1Q86VZ5 419 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 CSRNP1Q96S65 589 aa12.73□□□□□ -0.37
PCDHGC3-201ENST00000308177 RHOXF2BP0C7M4 288 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 PRPHP41219 470 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 PPP2R3AQ06190 1150 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 NFIXQ14938 502 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 SMIM5Q71RC9 77 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 MYCT1Q8N699 235 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 CCDC51Q96ER9 411 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 RHOXF2Q9BQY4 288 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 AMNQ9BXJ7 453 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 PXDNQ92626 1479 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 GAS7O60861 476 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 RCAN1P53805 252 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 SMTNP53814 917 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 VPS72Q15906 364 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 CC2D2BQ6DHV5 1058 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 GPBP1Q86WP2 473 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 GRAMD1CQ8IYS0 662 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 SLF1Q9BQI6 1058 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 PLEKHG2Q9H7P9 1386 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 SALL3Q9BXA9 1300 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 CCDC169A6NNP5 214 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 ITPK1Q13572 414 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 TPH2Q8IWU9 490 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 MYOCDQ8IZQ8 938 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 CARD6Q9BX69 1037 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 CCDC113Q9H0I3 377 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 DHX36Q9H2U1 1008 aaKnown RBP12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 MRPL44Q9H9J2 332 aaKnown RBP12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 PYCARDQ9ULZ3 195 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 JCADQ9P266 1359 aa12.72□□□□□ -0.37
PCDHGC3-201ENST00000308177 TUBBP07437 444 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 KCTD1Q719H9 257 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 OR8K1Q8NGG5 319 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 AK8Q96MA6 479 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 GCNT3O95395 438 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 CTNNA2P26232 953 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 SLC9C1Q4G0N8 1177 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 MAEAQ7L5Y9 396 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 SLFN12Q8IYM2 578 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 TBCKQ8TEA7 893 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 FAM207AQ9NSI2 230 aaPredicted RBP12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 BCS1LQ9Y276 419 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 TAF6LQ9Y6J9 622 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 FOSP01100 380 aaPredicted RBP12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 CDC25AP30304 524 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 CDC25BP30305 580 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 JAKMIP2Q96AA8 810 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 CUEDC2Q9H467 287 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 MAGEF1Q9HAY2 307 aa12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 BCCIPQ9P287 314 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 MRPL11Q9Y3B7 192 aaKnown RBP12.71□□□□□ -0.37
PCDHGC3-201ENST00000308177 CLRN2A0PK11 232 aa12.71□□□□□ -0.38
PCDHGC3-201ENST00000308177 SLC16A2P36021 539 aa12.71□□□□□ -0.38
PCDHGC3-201ENST00000308177 DNM2P50570 870 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms