RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 NPY5RQ15761 445 aa20.14■□□□□ 0.81
KRT28-201ENST00000306658 ANO1Q5XXA6 986 aa20.14■□□□□ 0.81
KRT28-201ENST00000306658 FTOQ9C0B1 505 aaKnown RBP eCLIP20.14■□□□□ 0.81
KRT28-201ENST00000306658 VCPKMTQ9H867 229 aa20.14■□□□□ 0.81
KRT28-201ENST00000306658 PCDHA4Q9UN74 947 aa20.14■□□□□ 0.81
KRT28-201ENST00000306658 ATAD5Q96QE3 1844 aa20.14■□□□□ 0.81
KRT28-201ENST00000306658 ZBTB5O15062 677 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 STK38Q15208 465 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 BLIDQ8IZY5 108 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 CLIC4Q9Y696 253 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 TMEM232C9JQI7 657 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 GNA11P29992 359 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 INPP5BP32019 993 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 IKQ13123 557 aaPredicted RBP20.13■□□□□ 0.81
KRT28-201ENST00000306658 SCYL3Q8IZE3 742 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 SPICE1Q8N0Z3 855 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 DAGLBQ8NCG7 672 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 LINC00301Q8NCQ3 95 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 KCNG4Q8TDN1 519 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 MTMR8Q96EF0 704 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 WRNIP1Q96S55 665 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 NUP88Q99567 741 aaPredicted RBP20.13■□□□□ 0.81
KRT28-201ENST00000306658 FEZ1Q99689 392 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 ZMYND12Q9H0C1 365 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 C6orf50Q9HD87 102 aa20.13■□□□□ 0.81
KRT28-201ENST00000306658 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.13■□□□□ 0.81
KRT28-201ENST00000306658 USP17L10C9JJH3 530 aa20.12■□□□□ 0.81
KRT28-201ENST00000306658 SF3A1Q15459 793 aaKnown RBP20.12■□□□□ 0.81
KRT28-201ENST00000306658 TYW1BQ6NUM6 668 aa20.12■□□□□ 0.81
KRT28-201ENST00000306658 BTNL9Q6UXG8 535 aa20.12■□□□□ 0.81
KRT28-201ENST00000306658 GZF1Q9H116 711 aaPredicted RBP20.12■□□□□ 0.81
KRT28-201ENST00000306658 PICK1Q9NRD5 415 aa20.12■□□□□ 0.81
KRT28-201ENST00000306658 NOL7Q9UMY1 257 aaKnown RBP20.12■□□□□ 0.81
KRT28-201ENST00000306658 CAVIN1Q6NZI2 390 aaKnown RBP20.11■□□□□ 0.81
KRT28-201ENST00000306658 KRT26Q7Z3Y9 468 aa20.11■□□□□ 0.81
KRT28-201ENST00000306658 TNFRSF25Q93038 417 aa20.11■□□□□ 0.81
KRT28-201ENST00000306658 SYAP1Q96A49 352 aaPredicted RBP20.11■□□□□ 0.81
KRT28-201ENST00000306658 KLRG1Q96E93 195 aa20.11■□□□□ 0.81
KRT28-201ENST00000306658 SCN4AP35499 1836 aa20.11■□□□□ 0.81
KRT28-201ENST00000306658 ESYT2A0FGR8 921 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 SMCO2A6NFE2 343 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 SPTLC2O15270 562 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 ME1P48163 572 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 STAT2P52630 851 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 SLC39A14Q15043 492 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 TPRNQ4KMQ1 711 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 SYDE2Q5VT97 1194 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 PPP1R18Q6NYC8 613 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 PNMA8AQ86V59 439 aaPredicted RBP20.1■□□□□ 0.81
KRT28-201ENST00000306658 BICD2Q8TD16 824 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 CHURC1Q8WUH1 139 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 KIAA1683Q9H0B3 1180 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 AS3MTQ9HBK9 375 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 ZYXQ15942 572 aaKnown RBP20.1■□□□□ 0.81
KRT28-201ENST00000306658 CCDC84Q86UT8 332 aaPredicted RBP20.1■□□□□ 0.81
KRT28-201ENST00000306658 JMYQ8N9B5 988 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 PGBD1Q96JS3 809 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 GLIS2Q9BZE0 524 aaPredicted RBP20.1■□□□□ 0.81
KRT28-201ENST00000306658 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
KRT28-201ENST00000306658 CEP131Q9UPN4 1083 aa20.1■□□□□ 0.81
KRT28-201ENST00000306658 DOCK1Q14185 1865 aa20.09■□□□□ 0.81
KRT28-201ENST00000306658 TOB1P50616 345 aaPredicted RBP20.09■□□□□ 0.81
KRT28-201ENST00000306658 KIAA1755Q5JYT7 1200 aa20.09■□□□□ 0.81
KRT28-201ENST00000306658 FAM83BQ5T0W9 1011 aa20.09■□□□□ 0.81
KRT28-201ENST00000306658 LPAR1Q92633 364 aa20.09■□□□□ 0.81
KRT28-201ENST00000306658 ZKSCAN4Q969J2 545 aaPredicted RBP20.09■□□□□ 0.81
KRT28-201ENST00000306658 WDR18Q9BV38 432 aa20.09■□□□□ 0.81
KRT28-201ENST00000306658 ADM5C9JUS6 153 aa20.08■□□□□ 0.81
KRT28-201ENST00000306658 PPP1R12BO60237 982 aaPredicted RBP20.08■□□□□ 0.81
KRT28-201ENST00000306658 PLA2G6O60733 806 aa20.08■□□□□ 0.81
KRT28-201ENST00000306658 TRAPPC10P48553 1259 aa20.08■□□□□ 0.81
KRT28-201ENST00000306658 USP14P54578 494 aa20.08■□□□□ 0.81
KRT28-201ENST00000306658 CDC37Q16543 378 aaPredicted RBP20.08■□□□□ 0.81
KRT28-201ENST00000306658 QRICH1Q2TAL8 776 aa20.08■□□□□ 0.81
KRT28-201ENST00000306658 PIK3AP1Q6ZUJ8 805 aa20.08■□□□□ 0.81
KRT28-201ENST00000306658 FAM160B2Q86V87 743 aa20.08■□□□□ 0.81
KRT28-201ENST00000306658 COA7Q96BR5 231 aa20.08■□□□□ 0.81
KRT28-201ENST00000306658 SSC5DA1L4H1 1573 aa20.08■□□□□ 0.8
KRT28-201ENST00000306658 CCDC194A0A1B0GVG4 234 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 M0R2N6 131 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 PPP6R2O75170 966 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 USP2O75604 605 aaPredicted RBP20.07■□□□□ 0.8
KRT28-201ENST00000306658 PTPRAP18433 802 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 NF2P35240 595 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 EAPPQ56P03 285 aaPredicted RBP20.07■□□□□ 0.8
KRT28-201ENST00000306658 NOL9Q5SY16 702 aaKnown RBP20.07■□□□□ 0.8
KRT28-201ENST00000306658 ADALQ6DHV7 355 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.07■□□□□ 0.8
KRT28-201ENST00000306658 FEM1BQ9UK73 627 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 PCDHA7Q9UN72 937 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 PCDHA6Q9UN73 950 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 PCDHA8Q9Y5H6 950 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 TRIM75PA6NK02 468 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 ADCY7P51828 1080 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 TRAF1Q13077 416 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 GSE1Q14687 1217 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 PTPAQ15257 358 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 EARS2Q5JPH6 523 aaKnown RBP20.07■□□□□ 0.8
KRT28-201ENST00000306658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.07■□□□□ 0.8
KRT28-201ENST00000306658 AMNQ9BXJ7 453 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms