RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 NYXQ9GZU5 481 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 SOS2Q07890 1332 aaPredicted RBP14.78□□□□□ -0.04
DDX54-201ENST00000306014 TMEM110-MUSTN1A8MSY1 372 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 CCDC172P0C7W6 258 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 TNIP1Q15025 636 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 KCNB2Q92953 911 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 KAZALD1Q96I82 304 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 CCNL1Q9UK58 526 aaPredicted RBP14.78□□□□□ -0.04
DDX54-201ENST00000306014 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX54-201ENST00000306014 KDM4FA0A1W2PPD8 638 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 BUB1O43683 1085 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 FDPSP14324 419 aaKnown RBP14.78□□□□□ -0.04
DDX54-201ENST00000306014 CETN2P41208 172 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 B4GALNT4Q76KP1 1039 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 SLC39A2Q9NP94 309 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 TMOD2Q9NZR1 351 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
DDX54-201ENST00000306014 ADAM21Q9UKJ8 722 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 NEURL4Q96JN8 1562 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 SMCO2A6NFE2 343 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 TEX33O43247 280 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 CEP104O60308 925 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 MFAP3LO75121 409 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 GUCY2FP51841 1108 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 DYNLL1P63167 89 aaKnown RBP14.78□□□□□ -0.04
DDX54-201ENST00000306014 GNGT1P63211 74 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 CALCRLQ16602 461 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 TICAM2Q86XR7 235 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 IRX2Q9BZI1 471 aaPredicted RBP14.78□□□□□ -0.04
DDX54-201ENST00000306014 TRIM31Q9BZY9 425 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 SAMM50Q9Y512 469 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 REXO1Q8N1G1 1221 aaKnown RBP14.77□□□□□ -0.04
DDX54-201ENST00000306014 ENGASEQ8NFI3 743 aa14.77□□□□□ -0.04
DDX54-201ENST00000306014 OXER1Q8TDS5 423 aa14.77□□□□□ -0.04
DDX54-201ENST00000306014 TGFBRAP1Q8WUH2 860 aa14.77□□□□□ -0.04
DDX54-201ENST00000306014 EXOC4Q96A65 974 aa14.77□□□□□ -0.04
DDX54-201ENST00000306014 BIN2Q9UBW5 565 aaPredicted RBP14.77□□□□□ -0.04
DDX54-201ENST00000306014 PTPRUQ92729 1446 aa14.77□□□□□ -0.04
DDX54-201ENST00000306014 LONP1P36776 959 aaKnown RBP14.77□□□□□ -0.05
DDX54-201ENST00000306014 ATP1A2P50993 1020 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 KLHL30Q0D2K2 578 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 CASP8Q14790 479 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 KRT31Q15323 416 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 METTL16Q86W50 562 aaKnown RBP14.77□□□□□ -0.05
DDX54-201ENST00000306014 BCAS4Q8TDM0 211 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 MYO1AQ9UBC5 1043 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 MROH1Q8NDA8 1641 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 UBN2Q6ZU65 1347 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 PLCG2P16885 1265 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 GBP2P32456 591 aaPredicted RBP14.77□□□□□ -0.05
DDX54-201ENST00000306014 PAK2Q13177 524 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 MTF1Q14872 753 aa14.77□□□□□ -0.05
DDX54-201ENST00000306014 RRP15Q9Y3B9 282 aaKnown RBP14.77□□□□□ -0.05
DDX54-201ENST00000306014 ARHGEF28Q8N1W1 1705 aaKnown RBP14.77□□□□□ -0.05
DDX54-201ENST00000306014 TMEM131LA2VDJ0 1609 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 FAM170AA1A519 330 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 NBPF26B4DH59 902 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 CETN3O15182 167 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 GNPATO15228 680 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 MRPL12P52815 198 aaKnown RBP14.76□□□□□ -0.05
DDX54-201ENST00000306014 TTC19Q6DKK2 380 aaPredicted RBP14.76□□□□□ -0.05
DDX54-201ENST00000306014 NBPF10Q6P3W6 841 aaKnown RBP14.76□□□□□ -0.05
DDX54-201ENST00000306014 NYAP1Q6ZVC0 841 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 NBPF15Q8N660 670 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 SPDYE3A6NKU9 549 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 RNF40O75150 1001 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 DDAH1O94760 285 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 ASIC2Q16515 512 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 PTPROQ16827 1216 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 ARPP21Q9UBL0 812 aaPredicted RBP14.76□□□□□ -0.05
DDX54-201ENST00000306014 TRPC5Q9UL62 973 aaPredicted RBP14.76□□□□□ -0.05
DDX54-201ENST00000306014 FER1L4A9Z1Z3 1794 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 NDUFA10O95299 355 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 CYP27A1Q02318 531 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 SFMBT2Q5VUG0 894 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 CNOT6LQ96LI5 555 aaKnown RBP14.76□□□□□ -0.05
DDX54-201ENST00000306014 LY9Q9HBG7 655 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 TADA3O75528 432 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 POTEJP0CG39 1038 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 HYOU1Q9Y4L1 999 aa14.76□□□□□ -0.05
DDX54-201ENST00000306014 HLFQ16534 295 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 ZNF658Q5TYW1 1059 aaPredicted RBP14.75□□□□□ -0.05
DDX54-201ENST00000306014 HS2ST1Q7LGA3 356 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 CCDC25Q86WR0 208 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 QTRT2Q9H974 415 aaKnown RBP14.75□□□□□ -0.05
DDX54-201ENST00000306014 RASAL2Q9UJF2 1139 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 CEMIPQ8WUJ3 1361 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 PALLDQ8WX93 1383 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 PLEKHA8P1O95397 391 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 UBE4AQ14139 1066 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 SCLT1Q96NL6 688 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 GDAQ9Y2T3 454 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 FAM13AO94988 1023 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 OR52Z1P0C646 297 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 PLS1Q14651 629 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 TECPR2O15040 1411 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 TNS3Q68CZ2 1445 aa14.75□□□□□ -0.05
DDX54-201ENST00000306014 NF2P35240 595 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 CCT5P48643 541 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 LIG3P49916 1009 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms