RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 ASGR1P07306 291 aa12.2□□□□□ -0.46
COL4A3-201ENST00000304990 TFF2Q03403 129 aa12.2□□□□□ -0.46
COL4A3-201ENST00000304990 KIAA1755Q5JYT7 1200 aa12.2□□□□□ -0.46
COL4A3-201ENST00000304990 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
COL4A3-201ENST00000304990 TMX2Q9Y320 296 aa12.2□□□□□ -0.46
COL4A3-201ENST00000304990 CTDP1Q9Y5B0 961 aaPredicted RBP12.2□□□□□ -0.46
COL4A3-201ENST00000304990 ZBBXA8MT70 800 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
COL4A3-201ENST00000304990 GTPBP6O43824 516 aaPredicted RBP12.19□□□□□ -0.46
COL4A3-201ENST00000304990 DUSP11O75319 330 aaKnown RBP12.19□□□□□ -0.46
COL4A3-201ENST00000304990 BMP1P13497 986 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 CYP2C18P33260 490 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 KCNQ1P51787 676 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 GABPAQ06546 454 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 GNASQ5JWF2 1037 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 TMEM31Q5JXX7 168 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 RASIP1Q5U651 963 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 TMED8Q6PL24 325 aaPredicted RBP12.19□□□□□ -0.46
COL4A3-201ENST00000304990 OTOP2Q7RTS6 562 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 CLEC10AQ8IUN9 316 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 AMOTL1Q8IY63 956 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 MSL3Q8N5Y2 521 aaKnown RBP12.19□□□□□ -0.46
COL4A3-201ENST00000304990 KLHDC9Q8NEP7 349 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 HERVK_113Q902F9 699 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 ARHGAP45Q92619 1136 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 LRFN3Q9BTN0 628 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 TLR7Q9NYK1 1049 aaKnown RBP12.19□□□□□ -0.46
COL4A3-201ENST00000304990 SWAP70Q9UH65 585 aa12.19□□□□□ -0.46
COL4A3-201ENST00000304990 DBNLQ9UJU6 430 aaKnown RBP12.19□□□□□ -0.46
COL4A3-201ENST00000304990 SYNGAP1Q96PV0 1343 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 MYADML2A6NDP7 307 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 CDK7P50613 346 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 RABGGTBP53611 331 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 NOL8Q76FK4 1167 aaKnown RBP12.18□□□□□ -0.46
COL4A3-201ENST00000304990 FRAT1Q92837 279 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-201ENST00000304990 HIPK3Q9H422 1215 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 ANTXR1Q9H6X2 564 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 FBXO28Q9NVF7 368 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 YBX2Q9Y2T7 364 aaKnown RBP12.18□□□□□ -0.46
COL4A3-201ENST00000304990 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-201ENST00000304990 SLC4A7Q9Y6M7 1214 aa12.18□□□□□ -0.46
COL4A3-201ENST00000304990 VWA5AO00534 786 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 BCAR3O75815 825 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 CYP2D6P10635 497 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 AKR1B1P15121 316 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 CST5P28325 142 aaPredicted RBP12.17□□□□□ -0.46
COL4A3-201ENST00000304990 FXR2P51116 673 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL4A3-201ENST00000304990 EVX2Q03828 476 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 ACVR2BQ13705 512 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 TTF1Q15361 905 aaPredicted RBP12.17□□□□□ -0.46
COL4A3-201ENST00000304990 SNRNP48Q6IEG0 339 aaKnown RBP12.17□□□□□ -0.46
COL4A3-201ENST00000304990 FAM126BQ8IXS8 530 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 RPUSD2Q8IZ73 545 aaKnown RBP12.17□□□□□ -0.46
COL4A3-201ENST00000304990 SDR42E1Q8WUS8 393 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 CLUAP1Q96AJ1 413 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 DYNLL2Q96FJ2 89 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 RIOK1Q9BRS2 568 aaKnown RBP12.17□□□□□ -0.46
COL4A3-201ENST00000304990 PPP1R9AQ9ULJ8 1098 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 BAZ2AQ9UIF9 1905 aaKnown RBP12.17□□□□□ -0.46
COL4A3-201ENST00000304990 LRRC37A2A6NM11 1700 aa12.17□□□□□ -0.46
COL4A3-201ENST00000304990 MCM3APO60318 1980 aa12.16□□□□□ -0.46
COL4A3-201ENST00000304990 SNAI1O95863 264 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-201ENST00000304990 RARSP54136 660 aaKnown RBP12.16□□□□□ -0.46
COL4A3-201ENST00000304990 CCL23P55773 120 aa12.16□□□□□ -0.46
COL4A3-201ENST00000304990 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-201ENST00000304990 CCDC144BQ3MJ40 725 aa12.16□□□□□ -0.46
COL4A3-201ENST00000304990 FAM83BQ5T0W9 1011 aa12.16□□□□□ -0.46
COL4A3-201ENST00000304990 SLC9C2Q5TAH2 1124 aa12.16□□□□□ -0.46
COL4A3-201ENST00000304990 CCSAPQ6IQ19 270 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-201ENST00000304990 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
COL4A3-201ENST00000304990 CCDC17Q96LX7 622 aa12.16□□□□□ -0.46
COL4A3-201ENST00000304990 TEX13BQ9BXU2 312 aa12.16□□□□□ -0.46
COL4A3-201ENST00000304990 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-201ENST00000304990 ADAMTS5Q9UNA0 930 aa12.16□□□□□ -0.46
COL4A3-201ENST00000304990 ERC2O15083 957 aa12.15□□□□□ -0.46
COL4A3-201ENST00000304990 EEF2P13639 858 aaKnown RBP12.15□□□□□ -0.46
COL4A3-201ENST00000304990 MYOGP15173 224 aa12.15□□□□□ -0.46
COL4A3-201ENST00000304990 GJA9P57773 515 aa12.15□□□□□ -0.46
COL4A3-201ENST00000304990 CPXCR1Q8N123 301 aa12.15□□□□□ -0.46
COL4A3-201ENST00000304990 ANKRD35Q8N283 1001 aa12.15□□□□□ -0.46
COL4A3-201ENST00000304990 ABHD16BQ9H3Z7 469 aa12.15□□□□□ -0.46
COL4A3-201ENST00000304990 CERS4Q9HA82 394 aa12.15□□□□□ -0.46
COL4A3-201ENST00000304990 DCP1AQ9NPI6 582 aaPredicted RBP12.15□□□□□ -0.46
COL4A3-201ENST00000304990 ZNF214Q9UL59 606 aaPredicted RBP12.15□□□□□ -0.46
COL4A3-201ENST00000304990 COG5Q9UP83 839 aa12.15□□□□□ -0.46
COL4A3-201ENST00000304990 PCDHA11Q9Y5I1 949 aa12.15□□□□□ -0.46
COL4A3-201ENST00000304990 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 TRIM27P14373 513 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 PDE6AP16499 860 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 ATP2A2P16615 1042 aaKnown RBP12.14□□□□□ -0.47
COL4A3-201ENST00000304990 ATP8B2P98198 1209 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 BEX3Q00994 111 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 TMEM67Q5HYA8 995 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 CXCL17Q6UXB2 119 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 MAMDC4Q6UXC1 1216 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 AACSQ86V21 672 aa12.14□□□□□ -0.47
COL4A3-201ENST00000304990 SIAH1Q8IUQ4 282 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms