RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 TNNI2P48788 182 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 SLC35G1Q2M3R5 365 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 SPDYE2Q495Y8 402 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 NOM1Q5C9Z4 860 aaKnown RBP16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 TATDN1Q6P1N9 297 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 FERMT2Q96AC1 680 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 FBXO2Q9UK22 296 aaPredicted RBP16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 BECN2A8MW95 431 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 PTGDRQ13258 359 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 NAT10Q9H0A0 1025 aaKnown RBP16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 RIOX1Q9H6W3 641 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 ATRNL1Q5VV63 1379 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 hCG_1984214I3L0E3 225 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 SLC16A2P36021 539 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 TYW1BQ6NUM6 668 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 PDILTQ8N807 584 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 ZNF713Q8N859 430 aaPredicted RBP16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 TNFRSF25Q93038 417 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 NFKBIEO00221 500 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 UPF1Q92900 1129 aaKnown RBP eCLIP16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 TIGD1Q96MW7 591 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 MYOZ2Q9NPC6 264 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 KIAA1468Q9P260 1216 aa16.55■□□□□ 0.24
SHCBP1-201ENST00000303383 KRT25Q7Z3Z0 450 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 CEP57L1Q8IYX8 460 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 CSRNP2Q9H175 543 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 VWA3AA6NCI4 1184 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 ADGRF4Q8IZF3 695 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 RASSF7Q02833 373 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 INF2Q27J81 1249 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 SHROOM1Q2M3G4 852 aaPredicted RBP16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 LUZP1Q86V48 1076 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 DAGLBQ8NCG7 672 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 DCAF4Q8WV16 495 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 COA7Q96BR5 231 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 ZMYND12Q9H0C1 365 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 PCDHA6Q9UN73 950 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 PCDHA8Q9Y5H6 950 aa16.54■□□□□ 0.24
SHCBP1-201ENST00000303383 BIN1O00499 593 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 POLR2DO15514 142 aaKnown RBP16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 REXO1Q8N1G1 1221 aaKnown RBP16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 CBX8Q9HC52 389 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 HPSEQ9Y251 543 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 COL4A5P29400 1685 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 PNMA6FA0A0J9YX94 578 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 ADCY7P51828 1080 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 RBM10P98175 930 aaKnown RBP16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 GRIN1Q05586 938 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 NONOQ15233 471 aaKnown RBP eCLIP16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 PSME4Q14997 1843 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 WNT10BO00744 389 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 NBPF9Q3BBW0 867 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 FKBP1CQ5VVH2 108 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 MTMR14Q8NCE2 650 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 RASSF8Q8NHQ8 419 aa16.53■□□□□ 0.24
SHCBP1-201ENST00000303383 RPS12P25398 132 aaKnown RBP16.52■□□□□ 0.24
SHCBP1-201ENST00000303383 TNFAIP1Q13829 316 aa16.52■□□□□ 0.24
SHCBP1-201ENST00000303383 JAKMIP3Q5VZ66 844 aa16.52■□□□□ 0.24
SHCBP1-201ENST00000303383 MIGA2Q7L4E1 593 aa16.52■□□□□ 0.24
SHCBP1-201ENST00000303383 MKL1Q969V6 931 aa16.52■□□□□ 0.24
SHCBP1-201ENST00000303383 MYH4Q9Y623 1939 aa16.52■□□□□ 0.24
SHCBP1-201ENST00000303383 F5H6K3 240 aa16.52■□□□□ 0.23
SHCBP1-201ENST00000303383 TXLNAP40222 546 aa16.52■□□□□ 0.23
SHCBP1-201ENST00000303383 KLRC3Q07444 240 aa16.52■□□□□ 0.23
SHCBP1-201ENST00000303383 KRBA2Q6ZNG9 492 aa16.52■□□□□ 0.23
SHCBP1-201ENST00000303383 JMJD4Q9H9V9 463 aa16.52■□□□□ 0.23
SHCBP1-201ENST00000303383 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.23
SHCBP1-201ENST00000303383 ATP2C1P98194 919 aaPredicted RBP16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 FAM83AQ86UY5 434 aa16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 ADCY5O95622 1261 aa16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 LETM2Q2VYF4 491 aa16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 LONRF3Q496Y0 759 aa16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 METTL16Q86W50 562 aaKnown RBP16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 COL2A1P02458 1487 aaPredicted RBP16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 ZNF646O15015 1829 aaPredicted RBP16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 ZBTB5O15062 677 aa16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 KANK3Q6NY19 840 aa16.51■□□□□ 0.23
SHCBP1-201ENST00000303383 ADAMTS3O15072 1205 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 DHX58Q96C10 678 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 A0A087WWV3 80 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 FAM237AA0A1B0GTK4 181 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 WNT7AO00755 349 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 GMPSP49915 693 aaPredicted RBP16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 MMP14P50281 582 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 MICALL2Q8IY33 904 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 SYMPKQ92797 1274 aaKnown RBP16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 SGIP1Q9BQI5 828 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 CCNT1O60563 726 aaKnown RBP16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 MRPL12P52815 198 aaKnown RBP16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 PNOCQ13519 176 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 ISM2Q6H9L7 571 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms