RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 NFKBIEO00221 500 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 LAD1O00515 517 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 MYO1BO43795 1136 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 EEF2P13639 858 aaKnown RBP12.1□□□□□ -0.47
CLP1-201ENST00000302731 ATP2B1P20020 1258 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 EIF6P56537 245 aaKnown RBP12.1□□□□□ -0.47
CLP1-201ENST00000302731 ICA1Q05084 483 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
CLP1-201ENST00000302731 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
CLP1-201ENST00000302731 KANK3Q6NY19 840 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 RASGRP2Q7LDG7 609 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 CCDC34Q96HJ3 373 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 PYM1Q9BRP8 204 aaKnown RBP12.1□□□□□ -0.47
CLP1-201ENST00000302731 CBX8Q9HC52 389 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 TUBE1Q9UJT0 475 aa12.1□□□□□ -0.47
CLP1-201ENST00000302731 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
CLP1-201ENST00000302731 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
CLP1-201ENST00000302731 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 PTGDRQ13258 359 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 ZRSR1Q15695 479 aaKnown RBP12.09□□□□□ -0.47
CLP1-201ENST00000302731 ZNF174Q15697 407 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 NOM1Q5C9Z4 860 aaKnown RBP12.09□□□□□ -0.47
CLP1-201ENST00000302731 HOMER1Q86YM7 354 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 CEP57L1Q8IYX8 460 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 CNNM3Q8NE01 707 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 GMCL1Q96IK5 515 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 BPIFA3Q9BQP9 254 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 CSRNP2Q9H175 543 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 DNAJC25Q9H1X3 360 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 USP25Q9UHP3 1055 aa12.09□□□□□ -0.47
CLP1-201ENST00000302731 CNTNAP1P78357 1384 aa12.08□□□□□ -0.47
CLP1-201ENST00000302731 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 WNT7AO00755 349 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 ZNF280AP59817 542 aaPredicted RBP12.08□□□□□ -0.48
CLP1-201ENST00000302731 GRIN1Q05586 938 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 SEPT2Q15019 361 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 IQCB1Q15051 598 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 LONRF3Q496Y0 759 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 SIAH1Q8IUQ4 282 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 GLT8D2Q9H1C3 349 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 CPVLQ9H3G5 476 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 JMJD4Q9H9V9 463 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLP1-201ENST00000302731 GPCPD1Q9NPB8 672 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 TCP10L2B9ZVM9 353 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 ZBTB5O15062 677 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 ADAMTS3O15072 1205 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 ADCY5O95622 1261 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 PRPHP41219 470 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 SLC1A4P43007 532 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 PTGER2P43116 358 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 NLRP12P59046 1061 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 ATP2B2Q01814 1243 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 MAP3K10Q02779 954 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 NONOQ15233 471 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLP1-201ENST00000302731 CCDC96Q2M329 555 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 SLFN13Q68D06 897 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 LUZP1Q86V48 1076 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 FAM43AQ8N2R8 423 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 C4orf32Q8N8J7 132 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
CLP1-201ENST00000302731 CLRN2A0PK11 232 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 WNT10BO00744 389 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 POLR2DO15514 142 aaKnown RBP12.07□□□□□ -0.48
CLP1-201ENST00000302731 SLURP2P0DP57 97 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 MCM7P33993 719 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 LONP1P36776 959 aaKnown RBP12.07□□□□□ -0.48
CLP1-201ENST00000302731 TNNI2P48788 182 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 MDM2Q00987 491 aaPredicted RBP12.07□□□□□ -0.48
CLP1-201ENST00000302731 NT5DC1Q5TFE4 455 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 C11orf57Q6ZUT1 292 aaPredicted RBP12.07□□□□□ -0.48
CLP1-201ENST00000302731 TEX2Q8IWB9 1127 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 REXO1Q8N1G1 1221 aaKnown RBP12.07□□□□□ -0.48
CLP1-201ENST00000302731 DPF2Q92785 391 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLP1-201ENST00000302731 MYOZ2Q9NPC6 264 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 CCDC39Q9UFE4 941 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 BCS1LQ9Y276 419 aa12.07□□□□□ -0.48
CLP1-201ENST00000302731 ARFGEF1Q9Y6D6 1849 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 F5H6K3 240 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 GOLGA6L19H0YKK7 550 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 FZD9O00144 591 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
CLP1-201ENST00000302731 GDF11O95390 407 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 GH2P01242 217 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 ADCY7P51828 1080 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 KLRC3Q07444 240 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 TNFAIP1Q13829 316 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 INF2Q27J81 1249 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 SPECC1Q5M775 1068 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 TTBK2Q6IQ55 1244 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 SARM1Q6SZW1 724 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 NEK8Q86SG6 692 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 TRIML1Q8N9V2 468 aa12.06□□□□□ -0.48
CLP1-201ENST00000302731 RASGRP4Q8TDF6 673 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms