RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 NBPF9Q3BBW0 867 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 KIAA1468Q9P260 1216 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 HDAC9Q9UKV0 1011 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 ZNF165P49910 485 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 ASPRV1Q53RT3 343 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 ISM2Q6H9L7 571 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 METTL16Q86W50 562 aaKnown RBP29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 PDILTQ8N807 584 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 TMEM39BQ9GZU3 492 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 CEP131Q9UPN4 1083 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 FER1L6Q2WGJ9 1857 aa29.34■■■□□ 2.29
SDCCAG3-201ENST00000298537 CCDC96Q2M329 555 aa29.33■■■□□ 2.29
SDCCAG3-201ENST00000298537 EPSTI1Q96J88 318 aa29.33■■■□□ 2.29
SDCCAG3-201ENST00000298537 GH2P01242 217 aa29.33■■■□□ 2.29
SDCCAG3-201ENST00000298537 SPDYE2Q495Y8 402 aa29.33■■■□□ 2.29
SDCCAG3-201ENST00000298537 ADGRF4Q8IZF3 695 aa29.33■■■□□ 2.29
SDCCAG3-201ENST00000298537 JMJD4Q9H9V9 463 aa29.33■■■□□ 2.29
SDCCAG3-201ENST00000298537 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.33■■■□□ 2.29
SDCCAG3-201ENST00000298537 SEC63Q9UGP8 760 aaKnown RBP29.33■■■□□ 2.29
SDCCAG3-201ENST00000298537 PPP1R11O60927 126 aaPredicted RBP29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 PNOCQ13519 176 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 INF2Q27J81 1249 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 ABCB5Q2M3G0 1257 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 UPF1Q92900 1129 aaKnown RBP eCLIP29.32■■■□□ 2.288e-9■■■□□ 16.6
SDCCAG3-201ENST00000298537 A0A087X0B3 334 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 SMCO2A6NFE2 343 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 ADCY5O95622 1261 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 IL17AQ16552 155 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 ZMYND12Q9H0C1 365 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 VPS33BQ9H267 617 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 TMOD2Q9NZR1 351 aa29.32■■■□□ 2.28
SDCCAG3-201ENST00000298537 ICA1Q05084 483 aa29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 STX1AQ16623 288 aa29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 CIAPIN1Q6FI81 312 aa29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 CCDC148Q8NFR7 591 aa29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 USP17L10C9JJH3 530 aa29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 POLR2DO15514 142 aaKnown RBP29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 AGBL3Q8NEM8 1001 aa29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 JDP2Q8WYK2 163 aa29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 TRIM44Q96DX7 344 aaPredicted RBP29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 NUP88Q99567 741 aaPredicted RBP29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 KANSL2Q9H9L4 492 aa29.31■■■□□ 2.28
SDCCAG3-201ENST00000298537 SMARCA1P28370 1054 aa29.3■■■□□ 2.28
SDCCAG3-201ENST00000298537 DPCR1Q3MIW9 517 aa29.3■■■□□ 2.28
SDCCAG3-201ENST00000298537 DAGLBQ8NCG7 672 aa29.3■■■□□ 2.28
SDCCAG3-201ENST00000298537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.3■■■□□ 2.287e-10■■■□□ 15.6
SDCCAG3-201ENST00000298537 VWA3AA6NCI4 1184 aa29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 WNT10BO00744 389 aa29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 ATP2C1P98194 919 aaPredicted RBP29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 KRBA2Q6ZNG9 492 aa29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 GRAMD1CQ8IYS0 662 aa29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 RRAGDQ9NQL2 400 aaPredicted RBP29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 TMEM260Q9NX78 707 aa29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 CCDC194A0A1B0GVG4 234 aa29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 RBM26Q5T8P6 1007 aaKnown RBP29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 MIGA2Q7L4E1 593 aa29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 FAM151AQ8WW52 585 aa29.29■■■□□ 2.28
SDCCAG3-201ENST00000298537 IQCB1Q15051 598 aa29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 TMEM179Q6ZVK1 233 aa29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 TIGD1Q96MW7 591 aa29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 NYAP2Q9P242 653 aa29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 SERTAD1Q9UHV2 236 aa29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 A0A1W2PRG0 241 aa29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 ZNF579Q8NAF0 562 aaKnown RBP29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 CNNM3Q8NE01 707 aa29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 MKL1Q969V6 931 aa29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 BIN2Q9UBW5 565 aaPredicted RBP29.28■■■□□ 2.28
SDCCAG3-201ENST00000298537 SLFN13Q68D06 897 aa29.27■■■□□ 2.28
SDCCAG3-201ENST00000298537 C4orf32Q8N8J7 132 aa29.27■■■□□ 2.28
SDCCAG3-201ENST00000298537 SYMPKQ92797 1274 aaKnown RBP29.27■■■□□ 2.28
SDCCAG3-201ENST00000298537 JAKMIP3Q5VZ66 844 aa29.27■■■□□ 2.28
SDCCAG3-201ENST00000298537 ZBED3Q96IU2 234 aaPredicted RBP29.27■■■□□ 2.28
SDCCAG3-201ENST00000298537 TMEM60Q9H2L4 133 aa29.27■■■□□ 2.28
SDCCAG3-201ENST00000298537 MYOZ2Q9NPC6 264 aa29.27■■■□□ 2.28
SDCCAG3-201ENST00000298537 FAM13BQ9NYF5 915 aa29.27■■■□□ 2.28
SDCCAG3-201ENST00000298537 CD2APQ9Y5K6 639 aa29.27■■■□□ 2.28
SDCCAG3-201ENST00000298537 PRR29P0C7W0 189 aa29.26■■■□□ 2.27
SDCCAG3-201ENST00000298537 TRAPPC10P48553 1259 aa29.26■■■□□ 2.27
SDCCAG3-201ENST00000298537 SNAP25P60880 206 aa29.26■■■□□ 2.27
SDCCAG3-201ENST00000298537 ECE1P42892 770 aa29.26■■■□□ 2.27
SDCCAG3-201ENST00000298537 SLC1A4P43007 532 aa29.26■■■□□ 2.27
SDCCAG3-201ENST00000298537 ASTN2O75129 1339 aaPredicted RBP29.26■■■□□ 2.27
SDCCAG3-201ENST00000298537 F5H6K3 240 aa29.25■■■□□ 2.27
SDCCAG3-201ENST00000298537 CDC25AP30304 524 aa29.25■■■□□ 2.27
SDCCAG3-201ENST00000298537 KLRC3Q07444 240 aa29.25■■■□□ 2.27
SDCCAG3-201ENST00000298537 ANO10Q9NW15 660 aa29.25■■■□□ 2.27
SDCCAG3-201ENST00000298537 COL2A1P02458 1487 aaPredicted RBP29.24■■■□□ 2.27
SDCCAG3-201ENST00000298537 MDM2Q00987 491 aaPredicted RBP29.24■■■□□ 2.27
SDCCAG3-201ENST00000298537 GPATCH4Q5T3I0 446 aaKnown RBP29.24■■■□□ 2.27
SDCCAG3-201ENST00000298537 DHX40Q8IX18 779 aaKnown RBP29.24■■■□□ 2.27
SDCCAG3-201ENST00000298537 SPICE1Q8N0Z3 855 aa29.24■■■□□ 2.27
SDCCAG3-201ENST00000298537 C6orf50Q9HD87 102 aa29.24■■■□□ 2.27
SDCCAG3-201ENST00000298537 GALNT17Q6IS24 598 aa29.23■■■□□ 2.27
SDCCAG3-201ENST00000298537 MTMR14Q8NCE2 650 aa29.23■■■□□ 2.27
SDCCAG3-201ENST00000298537 ACTN4O43707 911 aaKnown RBP29.23■■■□□ 2.27
SDCCAG3-201ENST00000298537 NDUFB10O96000 172 aa29.23■■■□□ 2.27
SDCCAG3-201ENST00000298537 TAL1P17542 331 aaPredicted RBP29.23■■■□□ 2.27
SDCCAG3-201ENST00000298537 KIAA1755Q5JYT7 1200 aa29.23■■■□□ 2.27
SDCCAG3-201ENST00000298537 ACER1Q8TDN7 264 aa29.23■■■□□ 2.27
SDCCAG3-201ENST00000298537 FERMT2Q96AC1 680 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms