RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 MED15Q96RN5 788 aa7.5□□□□□ -1.21
DEFB1-201ENST00000297439 SPZ1Q9BXG8 430 aa7.5□□□□□ -1.21
DEFB1-201ENST00000297439 CUEDC2Q9H467 287 aa7.5□□□□□ -1.21
DEFB1-201ENST00000297439 RMND1Q9NWS8 449 aa7.5□□□□□ -1.21
DEFB1-201ENST00000297439 PODXL2Q9NZ53 605 aa7.5□□□□□ -1.21
DEFB1-201ENST00000297439 VPS54Q9P1Q0 977 aa7.5□□□□□ -1.21
DEFB1-201ENST00000297439 V9GY48 417 aaPredicted RBP7.5□□□□□ -1.21
DEFB1-201ENST00000297439 BAZ2AQ9UIF9 1905 aaKnown RBP7.5□□□□□ -1.21
DEFB1-201ENST00000297439 MYO3BQ8WXR4 1341 aa7.5□□□□□ -1.21
DEFB1-201ENST00000297439 LTBP1Q14766 1721 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 NAV1Q8NEY1 1877 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 MYH2Q9UKX2 1941 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 ESYT2A0FGR8 921 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 TSPY2A6NKD2 308 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 LDHBP07195 334 aaKnown RBP7.49□□□□□ -1.21
DEFB1-201ENST00000297439 IL1R1P14778 569 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 PRDX5P30044 214 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 HOXA10P31260 410 aaPredicted RBP7.49□□□□□ -1.21
DEFB1-201ENST00000297439 PPP1R2P41236 205 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 FAM193AP78312 1265 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 FMR1Q06787 632 aaKnown RBP eCLIP7.49□□□□□ -1.21
DEFB1-201ENST00000297439 TRIM14Q14142 442 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 KCNB1Q14721 858 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 FAM98CQ17RN3 349 aaKnown RBP7.49□□□□□ -1.21
DEFB1-201ENST00000297439 PPP4R3BQ5MIZ7 849 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 PDXDC2PQ6P474 469 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 DZIP1Q86YF9 867 aaKnown RBP7.49□□□□□ -1.21
DEFB1-201ENST00000297439 SLF2Q8IX21 1173 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 C4orf32Q8N8J7 132 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 ZNF397Q8NF99 534 aaPredicted RBP7.49□□□□□ -1.21
DEFB1-201ENST00000297439 DPF2Q92785 391 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 SYMPKQ92797 1274 aaKnown RBP7.49□□□□□ -1.21
DEFB1-201ENST00000297439 PAGE5Q96GU1 130 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 AK8Q96MA6 479 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 CCSER1Q9C0I3 900 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 KAT14Q9H8E8 782 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 LIMA1Q9UHB6 759 aaKnown RBP7.49□□□□□ -1.21
DEFB1-201ENST00000297439 CCNL1Q9UK58 526 aaPredicted RBP7.49□□□□□ -1.21
DEFB1-201ENST00000297439 PCDHA4Q9UN74 947 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 SUGT1Q9Y2Z0 365 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 GAKO14976 1311 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 SYNRGQ9UMZ2 1314 aa7.49□□□□□ -1.21
DEFB1-201ENST00000297439 A0A087X0B3 334 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 CYP2D7A0A087X1C5 515 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 GPR75-ASB3A0A0A6YYF3 556 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 KLRG2A4D1S0 409 aaPredicted RBP7.48□□□□□ -1.21
DEFB1-201ENST00000297439 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
DEFB1-201ENST00000297439 PPP1R3GB7ZBB8 358 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 GNPATO15228 680 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 FOXN1O15353 648 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 HRO43593 1189 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TBC1D12O60347 775 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TPM1P09493 284 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TAF1P21675 1872 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 ATP2B4P23634 1241 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 KLRK1P26718 216 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TXLNAP40222 546 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 PSEN2P49810 448 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 NLRP5P59047 1200 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TUBB4BP68371 445 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 PTGDRQ13258 359 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TUBB2AQ13885 445 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 QSER1Q2KHR3 1735 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 COBLL1Q53SF7 1204 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 EARS2Q5JPH6 523 aaKnown RBP7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TRIM65Q6PJ69 517 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 FOXR2Q6PJQ5 311 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 CREBRFQ8IUR6 639 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 REXO1L1PQ8IX06 675 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 BLIDQ8IZY5 108 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TC2NQ8N9U0 490 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 PNMA1Q8ND90 353 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 NEDD1Q8NHV4 660 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 SNED1Q8TER0 1413 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TBC1D22AQ8WUA7 517 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 CCDC12Q8WUD4 166 aaPredicted RBP7.48□□□□□ -1.21
DEFB1-201ENST00000297439 ARHGEF1Q92888 912 aaKnown RBP7.48□□□□□ -1.21
DEFB1-201ENST00000297439 TUBB2BQ9BVA1 445 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 RTFDC1Q9BY42 306 aaPredicted RBP7.48□□□□□ -1.21
DEFB1-201ENST00000297439 RYDENQ9NUL5 291 aaKnown RBP7.48□□□□□ -1.21
DEFB1-201ENST00000297439 BARHL2Q9NY43 387 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 OGFRQ9NZT2 677 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 ADD3Q9UEY8 706 aaKnown RBP7.48□□□□□ -1.21
DEFB1-201ENST00000297439 DNAI1Q9UI46 699 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 RWDD2AQ9UIY3 292 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 KAT6BQ8WYB5 2073 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 FAM205AQ6ZU69 1335 aa7.48□□□□□ -1.21
DEFB1-201ENST00000297439 WTIPA6NIX2 430 aaPredicted RBP7.47□□□□□ -1.21
DEFB1-201ENST00000297439 PRDM1O75626 825 aa7.47□□□□□ -1.21
DEFB1-201ENST00000297439 BBOX1O75936 387 aa7.47□□□□□ -1.21
DEFB1-201ENST00000297439 FILIP1LQ4L180 1135 aa7.47□□□□□ -1.21
DEFB1-201ENST00000297439 TRAPPC3LQ5T215 181 aa7.47□□□□□ -1.21
DEFB1-201ENST00000297439 ZNF658Q5TYW1 1059 aaPredicted RBP7.47□□□□□ -1.21
DEFB1-201ENST00000297439 DMRTA1Q5VZB9 504 aa7.47□□□□□ -1.21
DEFB1-201ENST00000297439 C16orf86Q6ZW13 317 aa7.47□□□□□ -1.21
DEFB1-201ENST00000297439 USP49Q70CQ1 688 aa7.47□□□□□ -1.21
DEFB1-201ENST00000297439 CNGA4Q8IV77 575 aa7.47□□□□□ -1.21
DEFB1-201ENST00000297439 HOMEZQ8IX15 550 aa7.47□□□□□ -1.21
DEFB1-201ENST00000297439 CMTR1Q8N1G2 835 aaKnown RBP7.47□□□□□ -1.21
DEFB1-201ENST00000297439 CCDC82Q8N4S0 544 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms