RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 MAGI2Q86UL8 1455 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 BBOF1Q8ND07 529 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 RILPQ96NA2 401 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 PANX2Q96RD6 677 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 ARMCX3Q9UH62 379 aaPredicted RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 MYO1CO00159 1063 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 TTC19Q6DKK2 380 aaPredicted RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 GBP7Q8N8V2 638 aaPredicted RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 ZC3H12CQ9C0D7 883 aaKnown RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 NSFL1CQ9UNZ2 370 aaKnown RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 NCKAP5LQ9HCH0 1330 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 ENC1O14682 589 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 PEX19P40855 299 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 UNC5CLQ8IV45 518 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 SYMPKQ92797 1274 aaKnown RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 ATP2A3Q93084 1043 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 FOXP1Q9H334 677 aaPredicted RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 Q9H521 79 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 BZW2Q9Y6E2 419 aaKnown RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 GCC2Q8IWJ2 1684 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 hCG_1642624A0A1W2PR95 340 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 DKC1O60832 514 aaKnown RBP eCLIP12.12□□□□□ -0.47
PBRM1-201ENST00000296302 GABPB2Q8TAK5 448 aaPredicted RBP12.12□□□□□ -0.47
PBRM1-201ENST00000296302 KRT12Q99456 494 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 CUEDC2Q9H467 287 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 SAP30BPQ9UHR5 308 aaKnown RBP12.12□□□□□ -0.47
PBRM1-201ENST00000296302 BACH1O14867 736 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 CHMP2AO43633 222 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 RFC1P35251 1148 aaPredicted RBP12.12□□□□□ -0.47
PBRM1-201ENST00000296302 TUBGCP2Q9BSJ2 902 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 CNOT10Q9H9A5 744 aaKnown RBP12.12□□□□□ -0.47
PBRM1-201ENST00000296302 METTL14Q9HCE5 456 aaKnown RBP12.12□□□□□ -0.47
PBRM1-201ENST00000296302 USTQ9Y2C2 406 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 RABGAP1Q9Y3P9 1069 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 HEXIM1O94992 359 aaKnown RBP12.12□□□□□ -0.47
PBRM1-201ENST00000296302 FGAP02671 866 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 POLR2FP61218 127 aaKnown RBP12.12□□□□□ -0.47
PBRM1-201ENST00000296302 ARHGAP44Q17R89 818 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 MMS22LQ6ZRQ5 1243 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 CLEC17AQ6ZS10 378 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 CCDC89Q8N998 374 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 TRIM4Q9C037 500 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 MED23Q9ULK4 1368 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 PASKQ96RG2 1323 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 THAP12O43422 761 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 EHHADHQ08426 723 aa12.12□□□□□ -0.47
PBRM1-201ENST00000296302 ZSCAN10Q96SZ4 725 aaPredicted RBP12.12□□□□□ -0.47
PBRM1-201ENST00000296302 ABCB4P21439 1286 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 ADCY8P40145 1251 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 RASIP1Q5U651 963 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 IFNL3Q8IZI9 196 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 OGFOD1Q8N543 542 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 CCT6BQ92526 530 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 ZNF622Q969S3 477 aaKnown RBP eCLIP12.11□□□□□ -0.473e-6■■■■□ 24.4
PBRM1-201ENST00000296302 DHTKD1Q96HY7 919 aaPredicted RBP12.11□□□□□ -0.47
PBRM1-201ENST00000296302 OR52Z1P0C646 297 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 TRAPPC10P48553 1259 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 RNASELQ05823 741 aaKnown RBP12.11□□□□□ -0.47
PBRM1-201ENST00000296302 ICE2Q659A1 982 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 VCX3AQ9NNX9 186 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 SMCO2A6NFE2 343 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 GOLGA8FQ08AF8 430 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 GOLGA8DPQ0D2H9 430 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 RESTQ13127 1097 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 CNOT6LQ96LI5 555 aaKnown RBP12.11□□□□□ -0.47
PBRM1-201ENST00000296302 EPB41L5Q9HCM4 733 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 ARPP21Q9UBL0 812 aaPredicted RBP12.11□□□□□ -0.47
PBRM1-201ENST00000296302 ADAM21Q9UKJ8 722 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 OPHN1O60890 802 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 SCG2P13521 617 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 NNTQ13423 1086 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 PSMD6Q15008 389 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 GEN1Q17RS7 908 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 COPRSQ9NQ92 184 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
PBRM1-201ENST00000296302 IL9RQ01113 521 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 TFAP4Q01664 338 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 PTGDRQ13258 359 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 PALM2Q8IXS6 379 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 WHAMMQ8TF30 809 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 TACC3Q9Y6A5 838 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 WDR7Q9Y4E6 1490 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 ARHGAP42A6NI28 874 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 N4BP1O75113 896 aaKnown RBP12.1□□□□□ -0.47
PBRM1-201ENST00000296302 KIF23Q02241 960 aaPredicted RBP12.1□□□□□ -0.47
PBRM1-201ENST00000296302 RASSF7Q02833 373 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 STRN3Q13033 797 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 RASA3Q14644 834 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 LRRC8CQ8TDW0 803 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 IWS1Q96ST2 819 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.47
PBRM1-201ENST00000296302 SMIM24O75264 130 aa12.1□□□□□ -0.47
PBRM1-201ENST00000296302 DDAH1O94760 285 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms