RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 DDB1Q16531 1140 aa14.96□□□□□ -0.02
KCNIP3-201ENST00000295225 KIF4BQ2VIQ3 1234 aa14.96□□□□□ -0.02
KCNIP3-201ENST00000295225 PHF20Q9BVI0 1012 aa14.96□□□□□ -0.02
KCNIP3-201ENST00000295225 MYH8P13535 1937 aa14.96□□□□□ -0.02
KCNIP3-201ENST00000295225 CCDC189A1A4V9 331 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 USP17L3A6NCW0 530 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 USP17L4A6NCW7 530 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 STX10O60499 249 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 ZRANB2O95218 330 aaKnown RBP eCLIP14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 NTSR2O95665 410 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 KLK7P49862 253 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 TYW1BQ6NUM6 668 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 CC2D1AQ6P1N0 951 aaPredicted RBP14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 USP17L1Q7RTZ2 530 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 PNKPQ96T60 521 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 SRP68Q9UHB9 627 aaKnown RBP14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 ADGRG1Q9Y653 693 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 A0A1B0GTH6 734 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 KRT31Q15323 416 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 FKBP15Q5T1M5 1219 aa14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 FAM84BQ96KN1 310 aaPredicted RBP14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 SUDS3Q9H7L9 328 aaPredicted RBP14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 ADD3Q9UEY8 706 aaKnown RBP14.95□□□□□ -0.02
KCNIP3-201ENST00000295225 STK36Q9NRP7 1315 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 ITGB4P16144 1822 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 CCDC196A0A1B0GTZ2 297 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 TSPY2A6NKD2 308 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 PIP4K2BP78356 416 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 MECOMQ03112 1051 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 GABPB1Q06547 395 aaPredicted RBP14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 CCDC181Q5TID7 509 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 FAM53CQ9NYF3 392 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 GUCA1BQ9UMX6 200 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 STRCQ7RTU9 1775 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 MYH13Q9UKX3 1938 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 FAM170AA1A519 330 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 CCDC175P0C221 793 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 PAX7P23759 505 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 NOP2P46087 812 aaKnown RBP14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 DIXDC1Q155Q3 683 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 GRIK5Q16478 980 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 IQCA1Q86XH1 822 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 VAT1LQ9HCJ6 419 aa14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 SAP30BPQ9UHR5 308 aaKnown RBP14.94□□□□□ -0.02
KCNIP3-201ENST00000295225 EFCAB8A8MWE9 144 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 H3BQF6 201 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 RHBDL3P58872 404 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 TMCO4Q5TGY1 634 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 SPATA1Q5VX52 437 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 CAPZA3Q96KX2 299 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 NT5DC1Q5TFE4 455 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 ICE2Q659A1 982 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 ANKRD18AQ8IVF6 992 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 RNF41Q9H4P4 317 aaPredicted RBP14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 MCM9Q9NXL9 1143 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 MINPP1Q9UNW1 487 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 CHD4Q14839 1912 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 DDX60Q8IY21 1712 aaKnown RBP14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 MYH3P11055 1940 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 PRCPP42785 496 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 SMC1AQ14683 1233 aaKnown RBP14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 MARCH10Q8NA82 808 aaPredicted RBP14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 CXorf38Q8TB03 319 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 LRRC15Q8TF66 581 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 RNF26Q9BY78 433 aaPredicted RBP14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 NUCKS1Q9H1E3 243 aaKnown RBP14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 TMEM60Q9H2L4 133 aa14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 ARGLU1Q9NWB6 273 aaPredicted RBP14.93□□□□□ -0.02
KCNIP3-201ENST00000295225 ERVV-1B6SEH8 477 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 DNAJC21Q5F1R6 531 aaKnown RBP14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 NOA1Q8NC60 698 aaKnown RBP14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 NELFBQ8WX92 580 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 CEP131Q9UPN4 1083 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 MYH6P13533 1939 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 MFAP3LO75121 409 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 GUCY2CP25092 1073 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 HNRNPH2P55795 449 aaKnown RBP14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 CHMP4BP1P59074 171 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 UBXN1Q04323 297 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 INF2Q27J81 1249 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 AMIGO3Q86WK7 504 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 PLEKHA4Q9H4M7 779 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 STX8Q9UNK0 236 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 PNPLA7Q6ZV29 1317 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 PAPPAQ13219 1627 aa14.92□□□□□ -0.02
KCNIP3-201ENST00000295225 XBP1P17861 261 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 KRT9P35527 623 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 PPARDQ03181 441 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 GSPT2Q8IYD1 628 aaKnown RBP14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 CTCFLQ8NI51 663 aaPredicted RBP14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 DCP1AQ9NPI6 582 aaPredicted RBP14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 DUSP10Q9Y6W6 482 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 CNTNAP5Q8WYK1 1306 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 ANKRD65E5RJM6 399 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 GNAT2P19087 354 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 CAVIN4Q5BKX8 364 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 TBC1D9BQ66K14 1250 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 TMTC3Q6ZXV5 915 aa14.91□□□□□ -0.02
KCNIP3-201ENST00000295225 SPATA20Q8TB22 786 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms