RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 COA7Q96BR5 231 aa19.11■□□□□ 0.65
HIF3A-203ENST00000291300 JMJD4Q9H9V9 463 aa19.11■□□□□ 0.65
HIF3A-203ENST00000291300 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.11■□□□□ 0.65
HIF3A-203ENST00000291300 CNTNAP1P78357 1384 aa19.11■□□□□ 0.65
HIF3A-203ENST00000291300 PSDA5PKW4 1024 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-203ENST00000291300 PPP1R11O60927 126 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-203ENST00000291300 POLD1P28340 1107 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 ATP2C1P98194 919 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-203ENST00000291300 INF2Q27J81 1249 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 ASPRV1Q53RT3 343 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 CCDC125Q86Z20 511 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 C4orf32Q8N8J7 132 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 DAGLBQ8NCG7 672 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 CCDC17Q96LX7 622 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 CSRNP1Q96S65 589 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 SGIP1Q9BQI5 828 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 ZMYND12Q9H0C1 365 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 SERTAD1Q9UHV2 236 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 SMCO2A6NFE2 343 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 RAD21O60216 631 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 PRR29P0C7W0 189 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 MDM2Q00987 491 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-203ENST00000291300 DLGAP5Q15398 846 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 ADGRF4Q8IZF3 695 aa19.1■□□□□ 0.65
HIF3A-203ENST00000291300 VWA3AA6NCI4 1184 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 ESPNB1AK53 854 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 SMARCA1P28370 1054 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 FAM43AQ8N2R8 423 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 CCDC148Q8NFR7 591 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 SYMPKQ92797 1274 aaKnown RBP19.09■□□□□ 0.65
HIF3A-203ENST00000291300 ANO10Q9NW15 660 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 TMEM260Q9NX78 707 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 USP17L10C9JJH3 530 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 PRELPP51888 382 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 CCDC96Q2M329 555 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 CNNM3Q8NE01 707 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 FAM13BQ9NYF5 915 aa19.09■□□□□ 0.65
HIF3A-203ENST00000291300 SEC63Q9UGP8 760 aaKnown RBP19.09■□□□□ 0.65
HIF3A-203ENST00000291300 MORC2Q9Y6X9 1032 aaPredicted RBP19.09■□□□□ 0.65
HIF3A-203ENST00000291300 CCDC194A0A1B0GVG4 234 aa19.08■□□□□ 0.64
HIF3A-203ENST00000291300 ACTN4O43707 911 aaKnown RBP19.08■□□□□ 0.64
HIF3A-203ENST00000291300 EGFRP00533 1210 aa19.08■□□□□ 0.64
HIF3A-203ENST00000291300 GH2P01242 217 aa19.08■□□□□ 0.64
HIF3A-203ENST00000291300 TRAPPC10P48553 1259 aa19.08■□□□□ 0.64
HIF3A-203ENST00000291300 SPDYE2Q495Y8 402 aa19.08■□□□□ 0.64
HIF3A-203ENST00000291300 TRIM34Q9BYJ4 488 aa19.08■□□□□ 0.64
HIF3A-203ENST00000291300 TAOK3Q9H2K8 898 aa19.08■□□□□ 0.64
HIF3A-203ENST00000291300 TMEM60Q9H2L4 133 aa19.08■□□□□ 0.64
HIF3A-203ENST00000291300 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.08■□□□□ 0.64
HIF3A-203ENST00000291300 TUBE1Q9UJT0 475 aa19.08■□□□□ 0.64
HIF3A-203ENST00000291300 ABCB5Q2M3G0 1257 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 NBPF9Q3BBW0 867 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 OGFOD1Q8N543 542 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 NUP88Q99567 741 aaPredicted RBP19.07■□□□□ 0.64
HIF3A-203ENST00000291300 VEZTQ9HBM0 779 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 AOPEPQ8N6M6 819 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 MKL1Q969V6 931 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 TMEM39BQ9GZU3 492 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 KANSL2Q9H9L4 492 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 NYAP2Q9P242 653 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 BIN2Q9UBW5 565 aaPredicted RBP19.07■□□□□ 0.64
HIF3A-203ENST00000291300 HDAC9Q9UKV0 1011 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 BCS1LQ9Y276 419 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 PCDHA5Q9Y5H7 936 aa19.07■□□□□ 0.64
HIF3A-203ENST00000291300 A0A1W2PRG0 241 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 BMP6P22004 513 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 CDC25AP30304 524 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 NLRP12P59046 1061 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 RASSF7Q02833 373 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 ICA1Q05084 483 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 SOGA3Q5TF21 947 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 FERMT2Q96AC1 680 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 DHX58Q96C10 678 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 VPS33BQ9H267 617 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 JAKMIP3Q5VZ66 844 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 SLFN13Q68D06 897 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 GALNT17Q6IS24 598 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 TMEM179Q6ZVK1 233 aa19.06■□□□□ 0.64
HIF3A-203ENST00000291300 ZNF830Q96NB3 372 aaPredicted RBP19.06■□□□□ 0.64
HIF3A-203ENST00000291300 CASP1P29466 404 aa19.05■□□□□ 0.64
HIF3A-203ENST00000291300 PTGER2P43116 358 aa19.05■□□□□ 0.64
HIF3A-203ENST00000291300 SNAP25P60880 206 aa19.05■□□□□ 0.64
HIF3A-203ENST00000291300 SPC24Q8NBT2 197 aa19.05■□□□□ 0.64
HIF3A-203ENST00000291300 AGBL3Q8NEM8 1001 aa19.05■□□□□ 0.64
HIF3A-203ENST00000291300 ZBED3Q96IU2 234 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-203ENST00000291300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.05■□□□□ 0.64
HIF3A-203ENST00000291300 COL2A1P02458 1487 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-203ENST00000291300 ARFGEF1Q9Y6D6 1849 aa19.05■□□□□ 0.64
HIF3A-203ENST00000291300 EDIL3O43854 480 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 BMP15O95972 392 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 MIGA2Q7L4E1 593 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 CEP57L1Q8IYX8 460 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 NLGN2Q8NFZ4 835 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 FAM151AQ8WW52 585 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 C6orf50Q9HD87 102 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 TMOD2Q9NZR1 351 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 WNT10BO00744 389 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 CIAPIN1Q6FI81 312 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 MTMR8Q96EF0 704 aa19.04■□□□□ 0.64
HIF3A-203ENST00000291300 PNMA6FA0A0J9YX94 578 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms