RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 KIAA1755Q5JYT7 1200 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 TMTC3Q6ZXV5 915 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 KCTD1Q719H9 257 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 SULF1Q8IWU6 871 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 UBA5Q9GZZ9 404 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 CABP5Q9NP86 173 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 PAXBP1Q9Y5B6 917 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 V9GY48 417 aaPredicted RBP11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 CCDC66A2RUB6 948 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 PDE4CQ08493 712 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 CCDC178Q5BJE1 867 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 MAP1SQ66K74 1059 aaPredicted RBP11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 TTBK2Q6IQ55 1244 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 USP50Q70EL3 339 aaPredicted RBP11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 SHISA4Q96DD7 197 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 WRNIP1Q96S55 665 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 CEP350Q5VT06 3117 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 CCDC196A0A1B0GTZ2 297 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 KLRF2D3W0D1 207 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 FMNL1O95466 1100 aaPredicted RBP11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 CALM1P0DP23 149 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 CALM2P0DP24 149 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 CALM3P0DP25 149 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 SLC16A2P36021 539 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 RCAN1P53805 252 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 SSRP1Q08945 709 aaKnown RBP11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 GRM4Q14833 912 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 VAT1LQ9HCJ6 419 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 NMRK2Q9NPI5 230 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 WDR90Q96KV7 1748 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
LRTOMT-201ENST00000289488 IQCA1LA6NCM1 817 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 PALM3A6NDB9 673 aaPredicted RBP11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 PARP1P09874 1014 aaKnown RBP11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 NT5C2P49902 561 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 PKN1Q16512 942 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 KIF18AQ8NI77 898 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 C16orf45Q96MC5 204 aaPredicted RBP11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 ALG1Q9BT22 464 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 F5H6K3 240 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 H3BQV1 296 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 TRAF5O00463 557 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 CDKL5O76039 1030 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 TNNT1P13805 278 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 KLRC3Q07444 240 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 CPLX2Q6PUV4 134 aaKnown RBP11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 CCDC112Q8NEF3 446 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 NYAP2Q9P242 653 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 KCNJ14Q9UNX9 436 aa11.1□□□□□ -0.63
LRTOMT-201ENST00000289488 KIF5BP33176 963 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 TERF2Q15554 542 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 KRT222Q8N1A0 295 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 MKL1Q969V6 931 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 KLRG1Q96E93 195 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 C8orf76Q96K31 380 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 ADAMTS3O15072 1205 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 USP2O75604 605 aaPredicted RBP11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 NDUFB10O96000 172 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 ASNSP08243 561 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 SNHG28P0DPA3 235 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 PDCP20941 246 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 SLC1A4P43007 532 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 CCDC186Q7Z3E2 898 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 TRIM22Q8IYM9 498 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 ZNF397Q8NF99 534 aaPredicted RBP11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 FBXO18Q8NFZ0 1043 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 ZNF341Q9BYN7 854 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 VPS54Q9P1Q0 977 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 OTOFQ9HC10 1997 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 DOCK1Q14185 1865 aa11.09□□□□□ -0.63
LRTOMT-201ENST00000289488 CTNND1O60716 968 aaKnown RBP11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 SNAP25P60880 206 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 FAM193AP78312 1265 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 ZNF543Q08ER8 600 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 DCAF15Q66K64 600 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 CDCA5Q96FF9 252 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 MRVI1Q9Y6F6 885 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 KIF28PB7ZC32 967 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 CDK11BP21127 795 aaKnown RBP11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 DNM1Q05193 864 aaKnown RBP11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 PPP2R5BQ15173 497 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 MAP3K11Q16584 847 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 SUPT20HL1Q3ZLR7 823 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 KRT40Q6A162 431 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
LRTOMT-201ENST00000289488 SAMD1Q6SPF0 538 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms