RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 CYP21A2P08686 494 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 ARHGAP44Q17R89 818 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 ARFGAP2Q8N6H7 521 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 ARMCX3Q9UH62 379 aaPredicted RBP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 C21orf2O43822 256 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 RHOXF2BP0C7M4 288 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 FAM160B1Q5W0V3 765 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 IPO4Q8TEX9 1081 aaKnown RBP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 ATRIPQ8WXE1 791 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 RHOXF2Q9BQY4 288 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
PCDH1-201ENST00000287008 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 V9GYY5 206 aaPredicted RBP20.51■□□□□ 0.87
PCDH1-201ENST00000287008 POLGP54098 1239 aaPredicted RBP20.5■□□□□ 0.87
PCDH1-201ENST00000287008 CYP4A11Q02928 519 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 ZBTB16Q05516 673 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 PPM1EQ8WY54 764 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 STIM2Q9P246 746 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 SORBS3O60504 671 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 GTF2F1P35269 517 aaKnown RBP eCLIP20.5■□□□□ 0.87
PCDH1-201ENST00000287008 CFAP58Q5T655 872 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 FAM207AQ9NSI2 230 aaPredicted RBP20.5■□□□□ 0.87
PCDH1-201ENST00000287008 STK10O94804 968 aaKnown RBP20.5■□□□□ 0.87
PCDH1-201ENST00000287008 NLRC4Q9NPP4 1024 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 LRRIQ4A6NIV6 560 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 PTGDRQ13258 359 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 ST7Q9NRC1 585 aa20.5■□□□□ 0.87
PCDH1-201ENST00000287008 SMIM23A6NLE4 172 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 H7C1W4 665 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 FOXP4Q8IVH2 680 aaPredicted RBP20.49■□□□□ 0.87
PCDH1-201ENST00000287008 ATP6V0A1Q93050 837 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 RIOK1Q9BRS2 568 aaKnown RBP20.49■□□□□ 0.87
PCDH1-201ENST00000287008 PALM3A6NDB9 673 aaPredicted RBP20.49■□□□□ 0.87
PCDH1-201ENST00000287008 K7ENM7 598 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 ACTN4O43707 911 aaKnown RBP20.49■□□□□ 0.87
PCDH1-201ENST00000287008 IREB2P48200 963 aaKnown RBP20.49■□□□□ 0.87
PCDH1-201ENST00000287008 STAT1P42224 750 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 FAM26FQ5R3K3 315 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 SFMBT2Q5VUG0 894 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 IQCDQ96DY2 449 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 GADD45BO75293 160 aaPredicted RBP20.49■□□□□ 0.87
PCDH1-201ENST00000287008 KIAA1468Q9P260 1216 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 USTQ9Y2C2 406 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 AXIN2Q9Y2T1 843 aa20.49■□□□□ 0.87
PCDH1-201ENST00000287008 PNOCQ13519 176 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 LRCH2Q5VUJ6 765 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 TRMT2AQ8IZ69 625 aaKnown RBP20.48■□□□□ 0.87
PCDH1-201ENST00000287008 LCORLQ8N3X6 602 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 LSG1Q9H089 658 aaKnown RBP20.48■□□□□ 0.87
PCDH1-201ENST00000287008 USP17L8P0C7I0 530 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 RASGRF1Q13972 1273 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 KCTD1Q719H9 257 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 GABPB2Q8TAK5 448 aaPredicted RBP20.48■□□□□ 0.87
PCDH1-201ENST00000287008 NAPGQ99747 312 aaPredicted RBP20.48■□□□□ 0.87
PCDH1-201ENST00000287008 JPH2Q9BR39 696 aaPredicted RBP20.48■□□□□ 0.87
PCDH1-201ENST00000287008 PRKAB2O43741 272 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 CMA1P23946 247 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 HLFQ16534 295 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 NSMCE1Q8WV22 266 aa20.48■□□□□ 0.87
PCDH1-201ENST00000287008 TNNC2P02585 160 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 FAM193BQ96PV7 902 aaPredicted RBP20.47■□□□□ 0.87
PCDH1-201ENST00000287008 AP5M1Q9H0R1 490 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 MTMR6Q9Y217 621 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 PREX2Q70Z35 1606 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 IGBP1P78318 339 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 MXRA7P84157 204 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 DMP1Q13316 513 aaPredicted RBP20.47■□□□□ 0.87
PCDH1-201ENST00000287008 SECISBP2LQ93073 1101 aaKnown RBP20.47■□□□□ 0.87
PCDH1-201ENST00000287008 ARHGAP6O43182 974 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 LRMPQ12912 555 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 CEP128Q6ZU80 1094 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 KRT222Q8N1A0 295 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 CDHR1Q96JP9 859 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 SELENOSQ9BQE4 189 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 RBSNQ9H1K0 784 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 LONP1P36776 959 aaKnown RBP20.47■□□□□ 0.87
PCDH1-201ENST00000287008 TRAPPC10P48553 1259 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 RRAGAQ7L523 313 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 RASEFQ8IZ41 740 aa20.47■□□□□ 0.87
PCDH1-201ENST00000287008 SLC7A3Q8WY07 619 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 A2ML1A8K2U0 1454 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 ARMCX5Q6P1M9 558 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 OSBP2Q969R2 916 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 PANK4Q9NVE7 773 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 RABGAP1Q9Y3P9 1069 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 TMEM191BP0C7N4 346 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 STAT2P52630 851 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 IMPACTQ9P2X3 320 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 ZNF75DP51815 510 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 PPP1R21Q6ZMI0 780 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 SLC10A4Q96EP9 437 aa20.46■□□□□ 0.87
PCDH1-201ENST00000287008 METTL14Q9HCE5 456 aaKnown RBP20.46■□□□□ 0.87
PCDH1-201ENST00000287008 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.46■□□□□ 0.87
PCDH1-201ENST00000287008 GCFC2P16383 781 aaKnown RBP20.45■□□□□ 0.86
PCDH1-201ENST00000287008 RNASE9P60153 205 aaKnown RBP20.45■□□□□ 0.86
PCDH1-201ENST00000287008 PPP2R5AQ15172 486 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 MIGA2Q7L4E1 593 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 ZNF589Q86UQ0 364 aaPredicted RBP20.45■□□□□ 0.86
PCDH1-201ENST00000287008 GPIHBP1Q8IV16 184 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 WDR11Q9BZH6 1224 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms