RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SLIT1O75093 1534 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 CRKLP46109 303 aaKnown RBP14.99□□□□□ -0.01
SCAF4-201ENST00000286835 TUBB4BP68371 445 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 NLRP10Q86W26 655 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 NBPF3Q9H094 633 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 GSG1L2A8MUP6 293 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 F8W031 263 aaPredicted RBP14.99□□□□□ -0.01
SCAF4-201ENST00000286835 HSF2BPO75031 334 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 PTPROQ16827 1216 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 SGMS1Q86VZ5 419 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 ALS2CR12Q96Q35 445 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 ZSCAN10Q96SZ4 725 aaPredicted RBP14.99□□□□□ -0.01
SCAF4-201ENST00000286835 SAMM50Q9Y512 469 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 TTC26A0AVF1 554 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 EIF3CLB5ME19 914 aaKnown RBP14.99□□□□□ -0.01
SCAF4-201ENST00000286835 ATP1A1P05023 1023 aaKnown RBP14.99□□□□□ -0.01
SCAF4-201ENST00000286835 BCAS4Q8TDM0 211 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 EIF3CQ99613 913 aaKnown RBP14.99□□□□□ -0.01
SCAF4-201ENST00000286835 HAUS4Q9H6D7 363 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 FAM217BQ9NTX9 383 aaPredicted RBP14.99□□□□□ -0.01
SCAF4-201ENST00000286835 ZNF185O15231 689 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 TUBBP07437 444 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 ZNF18P17022 549 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 TRIM14Q14142 442 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 LETM2Q2VYF4 491 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 SOGA3Q5TF21 947 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 GIGYF2Q6Y7W6 1299 aaKnown RBP14.98□□□□□ -0.01
SCAF4-201ENST00000286835 C2CD5Q86YS7 1000 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 SECISBP2LQ93073 1101 aaKnown RBP14.98□□□□□ -0.01
SCAF4-201ENST00000286835 AATFQ9NY61 560 aaKnown RBP eCLIP14.98□□□□□ -0.014e-6■□□□□ 10.1
SCAF4-201ENST00000286835 RIPOR2Q9Y4F9 1068 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 TBX2Q13207 712 aaPredicted RBP14.98□□□□□ -0.01
SCAF4-201ENST00000286835 TCP11X2Q5H9J9 407 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 MKRN1Q9UHC7 482 aaKnown RBP14.98□□□□□ -0.01
SCAF4-201ENST00000286835 FMN2Q9NZ56 1722 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 GOLGA6L10A6NI86 522 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 NMT2O60551 498 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 ERVK-24P63145 666 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 IRX3P78415 501 aaPredicted RBP14.98□□□□□ -0.01
SCAF4-201ENST00000286835 SF3A3Q12874 501 aaKnown RBP eCLIP14.98□□□□□ -0.011e-7■■■□□ 16.1
SCAF4-201ENST00000286835 MMS19Q96T76 1030 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 MED4Q9NPJ6 270 aa14.98□□□□□ -0.01
SCAF4-201ENST00000286835 RGPD1P0DJD0 1748 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 PP2D1A8MPX8 630 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 CLSTN1O94985 981 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 MCM9Q9NXL9 1143 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 A0A087X0B3 334 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 LRRIQ3A6PVS8 624 aaPredicted RBP14.97□□□□□ -0.01
SCAF4-201ENST00000286835 NDUFAB1O14561 156 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 PRCPP42785 496 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 GNGT1P63211 74 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 RASGRP2Q7LDG7 609 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 CNBD1Q8NA66 436 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 PPM1EQ8WY54 764 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 ISCA1Q9BUE6 129 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 RNF26Q9BY78 433 aaPredicted RBP14.97□□□□□ -0.01
SCAF4-201ENST00000286835 SMIM22K7EJ46 135 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 GTPBP6O43824 516 aaPredicted RBP14.97□□□□□ -0.01
SCAF4-201ENST00000286835 KIF5BP33176 963 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 GGCXP38435 758 aa14.97□□□□□ -0.01
SCAF4-201ENST00000286835 EARS2Q5JPH6 523 aaKnown RBP14.97□□□□□ -0.01
SCAF4-201ENST00000286835 KCNQ2O43526 872 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 INF2Q27J81 1249 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 PARP10Q53GL7 1025 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 SMCR8Q8TEV9 937 aaPredicted RBP14.96□□□□□ -0.01
SCAF4-201ENST00000286835 FBXO3Q9UK99 471 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 L1RE1Q9UN81 338 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 NWD1Q149M9 1564 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 BUB1O43683 1085 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 DYMQ7RTS9 669 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 MAP3K15Q6ZN16 1313 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 WDR19Q8NEZ3 1342 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 HPDP32754 393 aaPredicted RBP14.96□□□□□ -0.01
SCAF4-201ENST00000286835 RDXP35241 583 aaKnown RBP14.96□□□□□ -0.01
SCAF4-201ENST00000286835 IFIH1Q9BYX4 1025 aaKnown RBP14.96□□□□□ -0.01
SCAF4-201ENST00000286835 NYXQ9GZU5 481 aa14.96□□□□□ -0.01
SCAF4-201ENST00000286835 TRIM37O94972 964 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 KRT18P05783 430 aaKnown RBP14.95□□□□□ -0.02
SCAF4-201ENST00000286835 ZNF579Q8NAF0 562 aaKnown RBP14.95□□□□□ -0.02
SCAF4-201ENST00000286835 PYM1Q9BRP8 204 aaKnown RBP14.95□□□□□ -0.02
SCAF4-201ENST00000286835 TUBGCP2Q9BSJ2 902 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 NLRC4Q9NPP4 1024 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 GUCY2FP51841 1108 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 APBA3O96018 575 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 MDM2Q00987 491 aaPredicted RBP14.95□□□□□ -0.02
SCAF4-201ENST00000286835 CCDC40Q4G0X9 1142 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 KRT26Q7Z3Y9 468 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 LRP10Q7Z4F1 713 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 RBM28Q9NW13 759 aaKnown RBP14.95□□□□□ -0.02
SCAF4-201ENST00000286835 LRWD1Q9UFC0 647 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 STK36Q9NRP7 1315 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 H7C1D1 291 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 NOP2P46087 812 aaKnown RBP14.95□□□□□ -0.02
SCAF4-201ENST00000286835 MUM1L1Q5H9M0 696 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 C8orf74Q6P047 294 aa14.95□□□□□ -0.02
SCAF4-201ENST00000286835 ZNF444Q8N0Y2 327 aaPredicted RBP14.95□□□□□ -0.02
SCAF4-201ENST00000286835 ENAHQ8N8S7 591 aaPredicted RBP14.95□□□□□ -0.02
SCAF4-201ENST00000286835 FER1L4A9Z1Z3 1794 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 RIMBP2O15034 1052 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 ERLIN2O94905 339 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms