RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 CRB1P82279 1406 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 H2AFXP16104 143 aaPredicted RBP17.43■□□□□ 0.38
USP43-201ENST00000285199 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
USP43-201ENST00000285199 TADA2BQ86TJ2 420 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 EFCAB13Q8IY85 973 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 LCORLQ8N3X6 602 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 KIF1BO60333 1816 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 MCAMP43121 646 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 SH2D3CQ8N5H7 860 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 ANKRD42Q8N9B4 389 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 TCP11Q8WWU5 503 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 PPP1R12CQ9BZL4 782 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 ATP7BP35670 1465 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 EIF4E1BA6NMX2 242 aaKnown RBP17.42■□□□□ 0.38
USP43-201ENST00000285199 GTPBP6O43824 516 aaPredicted RBP17.42■□□□□ 0.38
USP43-201ENST00000285199 PLEKHA8P1O95397 391 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 IL2RBP14784 551 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 PTPREP23469 700 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 GNAQP50148 359 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 DYNLL1P63167 89 aaKnown RBP17.42■□□□□ 0.38
USP43-201ENST00000285199 GIGYF2Q6Y7W6 1299 aaKnown RBP17.42■□□□□ 0.38
USP43-201ENST00000285199 REXO1L1PQ8IX06 675 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 NUP58Q9BVL2 599 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 RBM28Q9NW13 759 aaKnown RBP17.42■□□□□ 0.38
USP43-201ENST00000285199 RIPOR2Q9Y4F9 1068 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 SOS2Q07890 1332 aaPredicted RBP17.42■□□□□ 0.38
USP43-201ENST00000285199 ZNF609O15014 1411 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 CNNM4Q6P4Q7 775 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 MAEAQ7L5Y9 396 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 CCDC170Q8IYT3 715 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 PANX2Q96RD6 677 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 LCMT1Q9UIC8 334 aa17.42■□□□□ 0.38
USP43-201ENST00000285199 TTC26A0AVF1 554 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 NCK2O43639 380 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 ATP1A1P05023 1023 aaKnown RBP17.41■□□□□ 0.38
USP43-201ENST00000285199 VPS41P49754 854 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 EXOSC10Q01780 885 aaKnown RBP17.41■□□□□ 0.38
USP43-201ENST00000285199 RSRC1Q96IZ7 334 aaKnown RBP17.41■□□□□ 0.38
USP43-201ENST00000285199 PNKPQ96T60 521 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.41■□□□□ 0.38
USP43-201ENST00000285199 A0A1B0GUA9 196 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 H3BQF6 201 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 FMNL1O95466 1100 aaPredicted RBP17.41■□□□□ 0.38
USP43-201ENST00000285199 IFNAR1P17181 557 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 PEX26Q7Z412 305 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
USP43-201ENST00000285199 RRP36Q96EU6 259 aaKnown RBP17.41■□□□□ 0.38
USP43-201ENST00000285199 ZSCAN10Q96SZ4 725 aaPredicted RBP17.41■□□□□ 0.38
USP43-201ENST00000285199 NHEJ1Q9H9Q4 299 aaPredicted RBP17.41■□□□□ 0.38
USP43-201ENST00000285199 MLXIPQ9HAP2 919 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 SEC31BQ9NQW1 1179 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 ABHD10Q9NUJ1 306 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 AXIN2Q9Y2T1 843 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 ADD2P35612 726 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 CPVLQ9H3G5 476 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 L2HGDHQ9H9P8 463 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 SRPRBQ9Y5M8 271 aaKnown RBP17.41■□□□□ 0.38
USP43-201ENST00000285199 NEDD4P46934 1319 aa17.41■□□□□ 0.38
USP43-201ENST00000285199 PP2D1A8MPX8 630 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 SASH3O75995 380 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
USP43-201ENST00000285199 LSM14BQ9BX40 385 aaKnown RBP17.4■□□□□ 0.38
USP43-201ENST00000285199 EIF4A3P38919 411 aaKnown RBP17.4■□□□□ 0.38
USP43-201ENST00000285199 SFMBT2Q5VUG0 894 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 NBPF5PQ86XG9 351 aaPredicted RBP17.4■□□□□ 0.38
USP43-201ENST00000285199 BLIDQ8IZY5 108 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 MMS19Q96T76 1030 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 FOXP1Q9H334 677 aaPredicted RBP17.4■□□□□ 0.38
USP43-201ENST00000285199 KANSL2Q9H9L4 492 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 PDE8AO60658 829 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 PDE8BO95263 885 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 PKD2L1Q9P0L9 805 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 PCDHB13Q9Y5F0 798 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 BAZ2BQ9UIF8 2168 aaKnown RBP17.4■□□□□ 0.38
USP43-201ENST00000285199 GNA11P29992 359 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 ASIC2Q16515 512 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 FOXR1Q6PIV2 292 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 RPGRIP1Q96KN7 1286 aa17.4■□□□□ 0.38
USP43-201ENST00000285199 MAPKAPK5Q8IW41 473 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 MB21D2Q8IYB1 491 aaPredicted RBP17.39■□□□□ 0.37
USP43-201ENST00000285199 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
USP43-201ENST00000285199 FUT8Q9BYC5 575 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 EFCC1Q9HA90 598 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 KRIT1O00522 736 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 SCG2P13521 617 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 TCP1P17987 556 aaKnown RBP17.39■□□□□ 0.37
USP43-201ENST00000285199 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 PLCB3Q01970 1234 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 ARHGAP44Q17R89 818 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 CCDC84Q86UT8 332 aaPredicted RBP17.39■□□□□ 0.37
USP43-201ENST00000285199 CACNA2D3Q8IZS8 1091 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 CCDC26Q8TAB7 109 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 ASAP1Q9ULH1 1129 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 PACSIN2Q9UNF0 486 aaPredicted RBP17.39■□□□□ 0.37
USP43-201ENST00000285199 CD2APQ9Y5K6 639 aa17.39■□□□□ 0.37
USP43-201ENST00000285199 CHMP2AO43633 222 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 CTNNA2P26232 953 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 TCP11X2Q5H9J9 407 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 TRIM68Q6AZZ1 485 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 LRRC45Q96CN5 670 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms