RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PDE6AP16499 860 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 TRAPPC10P48553 1259 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 SRRM1Q8IYB3 904 aaKnown RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 CCHCR1Q8TD31 782 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 CACTINQ8WUQ7 758 aaKnown RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 XAGE2Q96GT9 111 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 AMNQ9BXJ7 453 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 IMPACTQ9P2X3 320 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 SLC13A4Q9UKG4 626 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 ZKSCAN5Q9Y2L8 839 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 GPATCH8Q9UKJ3 1502 aaKnown RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 XDHP47989 1333 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 PASKQ96RG2 1323 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 TESPA1A2RU30 521 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 GCFC2P16383 781 aaKnown RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 PCK1P35558 622 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 CDR2Q01850 454 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 GOLGA8FQ08AF8 430 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 GOLGA8DPQ0D2H9 430 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 PRPSAP1Q14558 356 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 ZNF174Q15697 407 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 FAM196AQ6ZSG2 479 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 POMGNT1Q8WZA1 660 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 SLC52A2Q9HAB3 445 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 AMFRQ9UKV5 643 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 BCS1LQ9Y276 419 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 TTI1O43156 1089 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 HPDP32754 393 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 TXKP42681 527 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 BSPRYQ5W0U4 402 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 CEP85Q6P2H3 762 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 FAM178BQ8IXR5 827 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 PARD3BQ8TEW8 1205 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 FAM89AQ96GI7 184 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 PSTPIP2Q9H939 334 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 KLHL14Q9P2G3 628 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 PRAG1Q86YV5 1406 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 KIAA0232Q92628 1395 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 HOXC9P31274 260 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 POLGP54098 1239 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 MTHFSDQ2M296 383 aaKnown RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 CWF19L2Q2TBE0 894 aaKnown RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 HSP90AA4PQ58FG1 418 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 CCDC170Q8IYT3 715 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 MRPL50Q8N5N7 158 aaKnown RBP4.46□□□□□ -1.7
SCN3A-201ENST00000283254 EXOC4Q96A65 974 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 VPS39Q96JC1 886 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 SEPT10Q9P0V9 454 aa4.46□□□□□ -1.7
SCN3A-201ENST00000283254 APBA3O96018 575 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 GAP43P17677 238 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 STX2P32856 288 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ARMCX2Q7L311 632 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 GPBP1Q86WP2 473 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 TEKT3Q9BXF9 490 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ANO3Q9BYT9 981 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 DHX36Q9H2U1 1008 aaKnown RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 PLXNC1O60486 1568 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 K7ENM7 598 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 CEP104O60308 925 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 OSBPP22059 807 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 CHMLP26374 656 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 RECQLP46063 649 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 AK2P54819 239 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 STX1BP61266 288 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 APBA1Q02410 837 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 PDCD2Q16342 344 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 KRT71Q3SY84 523 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ISM2Q6H9L7 571 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 MYOCDQ8IZQ8 938 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 OPTNQ96CV9 577 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ERO1AQ96HE7 468 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 GDAP1L1Q96MZ0 367 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 TMX1Q9H3N1 280 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 SLAIN2Q9P270 581 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 CPSF2Q9P2I0 782 aaKnown RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ZNF212Q9UDV6 495 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 STK17AQ9UEE5 414 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 FBXO40Q9UH90 709 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 JRKLQ9Y4A0 524 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ANGPTL3Q9Y5C1 460 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 SPDYE2BA6NHP3 402 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 PRDM1O75626 825 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 PYGLP06737 847 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 SPDYE6P0CI01 402 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 COPB2P35606 906 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 MAGEA1P43355 309 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ZNF131P52739 623 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 DRP2Q13474 957 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 DIXDC1Q155Q3 683 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 XKR9Q5GH70 373 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 MAPKAPK5Q8IW41 473 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 NME8Q8N427 588 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 TTC39CQ8N584 583 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 BICC1Q9H694 974 aaKnown RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 AATFQ9NY61 560 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 THEGQ9P2T0 379 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 SAP30BPQ9UHR5 308 aaKnown RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ZMYM3Q14202 1370 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 RGS16O15492 202 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms