RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TPTE2Q6XPS3 522 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 OTUD6AQ7L8S5 288 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 GTPBP10A4D1E9 387 aaKnown RBP9.54□□□□□ -0.88
NIPBL-201ENST00000282516 LMNAP02545 664 aaKnown RBP9.54□□□□□ -0.88
NIPBL-201ENST00000282516 TNNC2P02585 160 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 TBCCQ15814 346 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 TBC1D7Q9P0N9 293 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 IGF1RP08069 1367 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 ZFXP17010 805 aaPredicted RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 ST13P4Q8IZP2 240 aaPredicted RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 PIP4K2CQ8TBX8 421 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 GIPC2Q8TF65 315 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 RPS6KC1Q96S38 1066 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 NFE2L3Q9Y4A8 694 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 LONP1P36776 959 aaKnown RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 CWF19L2Q2TBE0 894 aaKnown RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 BBS5Q8N3I7 341 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 CDV3Q9UKY7 258 aaKnown RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.888e-7■■■□□ 19
NIPBL-201ENST00000282516 ZNF202O95125 648 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 ATP1A2P50993 1020 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 ATP8B2P98198 1209 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 DMP1Q13316 513 aaPredicted RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 NOP9Q86U38 636 aaKnown RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 UPF3AQ9H1J1 476 aaKnown RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 IRAK4Q9NWZ3 460 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 KCNK3O14649 394 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 PDE1BQ01064 536 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 TUBB6Q9BUF5 446 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 H3BRJ5 948 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 SLC1A4P43007 532 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 HP1BP3Q5SSJ5 553 aaPredicted RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 ATG16L1Q676U5 607 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 GRAMD4Q6IC98 578 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 CHST3Q7LGC8 479 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 TRIM59Q8IWR1 403 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 ZBTB8OSQ8IWT0 167 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 ATP6V1E2Q96A05 226 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 KCNJ18B7U540 433 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 LIG3P49916 1009 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 KCNJ12Q14500 433 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 YY1AP1Q9H869 796 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 SATB2Q9UPW6 733 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 MBD4O95243 580 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 PTPREP23469 700 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 NEK2P51955 445 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 SLC17A8Q8NDX2 589 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 FAM207AQ9NSI2 230 aaPredicted RBP9.53□□□□□ -0.88
NIPBL-201ENST00000282516 HESX1Q9UBX0 185 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 LRWD1Q9UFC0 647 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 FRMD3A2A2Y4 597 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 GAS7O60861 476 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 MTX1Q13505 466 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 NEUROG2Q9H2A3 272 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
NIPBL-201ENST00000282516 ZBED4O75132 1171 aa9.52□□□□□ -0.88
NIPBL-201ENST00000282516 RPS6KB1P23443 525 aa9.52□□□□□ -0.88
NIPBL-201ENST00000282516 EP400NLQ6ZTU2 488 aa9.52□□□□□ -0.88
NIPBL-201ENST00000282516 NUDCD3Q8IVD9 361 aa9.52□□□□□ -0.88
NIPBL-201ENST00000282516 TRPA1O75762 1119 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 TRIM11Q96F44 468 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 FGFR1OP2Q9NVK5 253 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 BFSP1Q12934 665 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 SEPT2Q15019 361 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 PUM3Q15397 648 aaKnown RBP9.52□□□□□ -0.89
NIPBL-201ENST00000282516 MAP7D3Q8IWC1 876 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 DEPTORQ8TB45 409 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 CCHCR1Q8TD31 782 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.52□□□□□ -0.89
NIPBL-201ENST00000282516 KDRP35968 1356 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 ATP8B3O60423 1300 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 SOS2Q07890 1332 aaPredicted RBP9.52□□□□□ -0.89
NIPBL-201ENST00000282516 CPP00450 1065 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 IFNA8P32881 189 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 ART3Q13508 389 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 LRRC37BQ96QE4 947 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 MAPK8IP1Q9UQF2 711 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 MSH6P52701 1360 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 EEF1GP26641 437 aaKnown RBP9.52□□□□□ -0.89
NIPBL-201ENST00000282516 NSFP46459 744 aaKnown RBP9.52□□□□□ -0.89
NIPBL-201ENST00000282516 PPP1R2P3Q6NXS1 205 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 PCDHB13Q9Y5F0 798 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 TOP2BQ02880 1626 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 NBPF14Q5TI25 921 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 RNF207Q6ZRF8 634 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 TRMT10CQ7L0Y3 403 aaKnown RBP9.52□□□□□ -0.89
NIPBL-201ENST00000282516 KIF9Q9HAQ2 790 aa9.52□□□□□ -0.89
NIPBL-201ENST00000282516 BZW2Q9Y6E2 419 aaKnown RBP9.52□□□□□ -0.89
NIPBL-201ENST00000282516 RXRAP19793 462 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 SF3A3Q12874 501 aaKnown RBP eCLIP9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ACBD5Q5T8D3 534 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-201ENST00000282516 LMBR1LQ6UX01 489 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 RAPH1Q70E73 1250 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 METTL13Q8N6R0 699 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ANLNQ9NQW6 1124 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 FAM95CA0A1B0GW59 222 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 CHEK2O96017 543 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 RNF217Q8TC41 542 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 PALMDQ9NP74 551 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 OLA1Q9NTK5 396 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms