RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 CALCOCO1Q9P1Z2 691 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 V9GYY5 206 aaPredicted RBP12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 LRRC10BA6NIK2 292 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 H7C1D1 291 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 WNT7AO00755 349 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 ATP8B1O43520 1251 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 RFC4P35249 363 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 SLC20A2Q08357 652 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 ERCC6LQ2NKX8 1250 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 ARHGAP29Q52LW3 1261 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 KRT25Q7Z3Z0 450 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 TMTC1Q8IUR5 882 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 CCSER1Q9C0I3 900 aa12.88□□□□□ -0.35
SIRPB1-202ENST00000279477 FOCADQ5VW36 1801 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 M0R2N6 131 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 KIF5CO60282 957 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 HOXA7P31268 230 aaPredicted RBP12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 STX17P56962 302 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 GOLGA8FQ08AF8 430 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 GOLGA8DPQ0D2H9 430 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 JAKMIP3Q5VZ66 844 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 TOGARAM2Q6ZUX3 1019 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 C4orf32Q8N8J7 132 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 CNBD1Q8NA66 436 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 RASSF8Q8NHQ8 419 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 MYO1AQ9UBC5 1043 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 MAD2L2Q9UI95 211 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 MRFAP1Q9Y605 127 aa12.87□□□□□ -0.35
SIRPB1-202ENST00000279477 N4BP3O15049 544 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 RBL2Q08999 1139 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 NELFBQ8WX92 580 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 IL17RBQ9NRM6 502 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 FAM53CQ9NYF3 392 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 PALM3A6NDB9 673 aaPredicted RBP12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 EEF1GP26641 437 aaKnown RBP12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 GNA11P29992 359 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 UBA7P41226 1012 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 COPB1P53618 953 aaKnown RBP12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 PPP2R3AQ06190 1150 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 KRT31Q15323 416 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 TCP11X2Q5H9J9 407 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 TMCO3Q6UWJ1 677 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 THAP9Q9H5L6 903 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 ADGRG1Q9Y653 693 aa12.86□□□□□ -0.35
SIRPB1-202ENST00000279477 FAM205AQ6ZU69 1335 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 KCNJ18B7U540 433 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 STXBP3O00186 592 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 PSMA7O14818 248 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 TEX33O43247 280 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 KCNJ12Q14500 433 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 TRAPPC3LQ5T215 181 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 CYP26C1Q6V0L0 522 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 C16orf86Q6ZW13 317 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 HEATR3Q7Z4Q2 680 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 TXNRD3Q86VQ6 643 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 TBC1D22AQ8WUA7 517 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 GOLGA1Q92805 767 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 RPGRQ92834 1020 aaKnown RBP12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 CARD6Q9BX69 1037 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 C6orf50Q9HD87 102 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 PCDHA6Q9UN73 950 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 PCDHA8Q9Y5H6 950 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 SNED1Q8TER0 1413 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 IL17AQ16552 155 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 RABGGTAQ92696 567 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 RTFDC1Q9BY42 306 aaPredicted RBP12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 ZMYND12Q9H0C1 365 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 BLZF1Q9H2G9 400 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 MAGEC2Q9UBF1 373 aaPredicted RBP12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 SEC63Q9UGP8 760 aaKnown RBP12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 LRRC37AA6NMS7 1700 aa12.85□□□□□ -0.35
SIRPB1-202ENST00000279477 A0A1W2PQC6 194 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 ESYT2A0FGR8 921 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 BICDL2A1A5D9 508 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 SOWAHDA6NJG2 315 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 RHOBTB3O94955 611 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 GYPCP04921 128 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 PARP1P09874 1014 aaKnown RBP12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 RASA1P20936 1047 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 CASP1P29466 404 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 CLCN6P51797 869 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 ST5P78524 1137 aa12.84□□□□□ -0.35
SIRPB1-202ENST00000279477 NONOQ15233 471 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms