RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PPARDQ03181 441 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 PDE4BQ07343 736 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 DYNC1I2Q13409 638 aaKnown RBP10.25□□□□□ -0.77
PDGFC-201ENST00000274071 EZH2Q15910 746 aaKnown RBP10.25□□□□□ -0.77
PDGFC-201ENST00000274071 TBC1D1Q86TI0 1168 aaPredicted RBP10.25□□□□□ -0.77
PDGFC-201ENST00000274071 FAM114A1Q8IWE2 563 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 CACNA2D3Q8IZS8 1091 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 SPICE1Q8N0Z3 855 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 LINC00301Q8NCQ3 95 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 MAIP1Q8WWC4 291 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 SLC35B4Q969S0 331 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 AGAP3Q96P47 875 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 SPATA7Q9P0W8 599 aa10.25□□□□□ -0.77
PDGFC-201ENST00000274071 PEAK1Q9H792 1746 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 UBN2Q6ZU65 1347 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 ZNF18P17022 549 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 CCND1P24385 295 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 CDC27P30260 824 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 GJA8P48165 433 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 ITGB3BPQ13352 177 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-201ENST00000274071 FKBP15Q5T1M5 1219 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 IQCKQ8N0W5 287 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 MAP4K1Q92918 833 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 ARHGEF10LQ9HCE6 1279 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 KDM6AO15550 1401 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-201ENST00000274071 ZNF142P52746 1687 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-201ENST00000274071 BACH1O14867 736 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 TRAPPC3O43617 180 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 CAPN15O75808 1086 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 MBD4O95243 580 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 CCNG1P51959 295 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 GLE1Q53GS7 698 aaKnown RBP10.24□□□□□ -0.77
PDGFC-201ENST00000274071 OLFM4Q6UX06 510 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 ERICH1Q86X53 443 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 TRIM10Q9UDY6 481 aa10.24□□□□□ -0.77
PDGFC-201ENST00000274071 PSMD14O00487 310 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 TEX33O43247 280 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 C2orf54Q08AI8 447 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 PABPC4Q13310 644 aaKnown RBP eCLIP10.23□□□□□ -0.77
PDGFC-201ENST00000274071 TAF11Q15544 211 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 RNF220Q5VTB9 566 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 PAPD7Q5XG87 772 aaKnown RBP10.23□□□□□ -0.77
PDGFC-201ENST00000274071 TRIM68Q6AZZ1 485 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 PHC3Q8NDX5 983 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 GUCA1BQ9UMX6 200 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 CLIC4Q9Y696 253 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 FMN2Q9NZ56 1722 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 C5orf60A6NFR6 353 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 ZNF185O15231 689 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 PFKFB1P16118 471 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 BMP6P22004 513 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 EPHB4P54760 987 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 MRPS25P82663 173 aaKnown RBP10.23□□□□□ -0.77
PDGFC-201ENST00000274071 PNOCQ13519 176 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 EMBQ6PCB8 327 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 APLFQ8IW19 511 aaPredicted RBP10.23□□□□□ -0.77
PDGFC-201ENST00000274071 ABTB2Q8N961 1025 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 SEC62Q99442 399 aaKnown RBP10.23□□□□□ -0.77
PDGFC-201ENST00000274071 ARPC5LQ9BPX5 153 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 LRRC1Q9BTT6 524 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 NFE2L3Q9Y4A8 694 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 ABCC6O95255 1503 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 CCT4P50991 539 aaKnown RBP10.23□□□□□ -0.77
PDGFC-201ENST00000274071 GUCY1B3Q02153 619 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 CKAP4Q07065 602 aaKnown RBP10.23□□□□□ -0.77
PDGFC-201ENST00000274071 LBRQ14739 615 aaKnown RBP10.23□□□□□ -0.77
PDGFC-201ENST00000274071 LONRF3Q496Y0 759 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 PPFIBP1Q86W92 1011 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 OPTNQ96CV9 577 aa10.23□□□□□ -0.77
PDGFC-201ENST00000274071 BZW2Q9Y6E2 419 aaKnown RBP10.23□□□□□ -0.77
PDGFC-201ENST00000274071 TRIM37O94972 964 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 VIMP08670 466 aaKnown RBP10.22□□□□□ -0.77
PDGFC-201ENST00000274071 HPDP32754 393 aaPredicted RBP10.22□□□□□ -0.77
PDGFC-201ENST00000274071 STAT6P42226 847 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 MRPS35P82673 323 aaKnown RBP10.22□□□□□ -0.77
PDGFC-201ENST00000274071 STK38Q15208 465 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 FOXP4Q8IVH2 680 aaPredicted RBP10.22□□□□□ -0.77
PDGFC-201ENST00000274071 ATP6V1G3Q96LB4 118 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 NDNQ99608 321 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 UNC45AQ9H3U1 944 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 ATXN10Q9UBB4 475 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 SBNO1A3KN83 1393 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 FLT4P35916 1363 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 CEMIPQ8WUJ3 1361 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 PIK3C2AO00443 1686 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 TMEM221A6NGB7 291 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 CCT8L1PA6NM43 557 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 ABLIM1O14639 778 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 CASP14P31944 242 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 ERVK-24P63145 666 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 SLC7A5Q01650 507 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 SGSM1Q2NKQ1 1148 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 GKAP1Q5VSY0 366 aaPredicted RBP10.22□□□□□ -0.77
PDGFC-201ENST00000274071 PRCCQ92733 491 aaPredicted RBP10.22□□□□□ -0.77
PDGFC-201ENST00000274071 KCNN1Q92952 543 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 CAVIN3Q969G5 261 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 JAKMIP2Q96AA8 810 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 AIDAQ96BJ3 306 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 TMOD4Q9NZQ9 345 aa10.22□□□□□ -0.77
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