RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 COBLO75128 1261 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 GH2P01242 217 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 VCAM1P19320 739 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 IGFBP4P22692 258 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 GSTO1P78417 241 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 LBX2Q6XYB7 198 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 METTL3Q86U44 580 aaKnown RBP10.28□□□□□ -0.76
RPS3A-201ENST00000274065 IL27Q8NEV9 243 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 TGFBRAP1Q8WUH2 860 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 LRFN3Q9BTN0 628 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 EPHX3Q9H6B9 360 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 GINM1Q9NU53 330 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 TMEM39AQ9NV64 488 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 AATFQ9NY61 560 aaKnown RBP eCLIP10.28□□□□□ -0.76
RPS3A-201ENST00000274065 RAI14Q9P0K7 980 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 PALD1Q9ULE6 856 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 FLT1P17948 1338 aa10.28□□□□□ -0.76
RPS3A-201ENST00000274065 MYO9BQ13459 2157 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 NRG2O14511 850 aaPredicted RBP10.27□□□□□ -0.77
RPS3A-201ENST00000274065 BMP1P13497 986 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 TFF2Q03403 129 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 FAAP100Q0VG06 881 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 CCDC129Q6ZRS4 1044 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 C16orf59Q7L2K0 433 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 FOXP4Q8IVH2 680 aaPredicted RBP10.27□□□□□ -0.77
RPS3A-201ENST00000274065 ACER1Q8TDN7 264 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 FEZ1Q99689 392 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 MOV10L1Q9BXT6 1211 aaKnown RBP10.27□□□□□ -0.77
RPS3A-201ENST00000274065 TRIM34Q9BYJ4 488 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 SAP30BPQ9UHR5 308 aaKnown RBP10.27□□□□□ -0.77
RPS3A-201ENST00000274065 PTPRCP08575 1304 aa10.27□□□□□ -0.77
RPS3A-201ENST00000274065 A0A1W2PQ45 241 aaPredicted RBP10.26□□□□□ -0.77
RPS3A-201ENST00000274065 A0A1W2PQY0 241 aa10.26□□□□□ -0.77
RPS3A-201ENST00000274065 PGK1P00558 417 aa10.26□□□□□ -0.77
RPS3A-201ENST00000274065 MVPQ14764 893 aaKnown RBP10.26□□□□□ -0.77
RPS3A-201ENST00000274065 TMEM240Q5SV17 173 aa10.26□□□□□ -0.77
RPS3A-201ENST00000274065 RASIP1Q5U651 963 aa10.26□□□□□ -0.77
RPS3A-201ENST00000274065 SPATA5Q8NB90 893 aa10.26□□□□□ -0.77
RPS3A-201ENST00000274065 SLC44A5Q8NCS7 719 aa10.26□□□□□ -0.77
RPS3A-201ENST00000274065 RPAP3Q9H6T3 665 aaPredicted RBP10.26□□□□□ -0.77
RPS3A-201ENST00000274065 COPRSQ9NQ92 184 aa10.26□□□□□ -0.77
RPS3A-201ENST00000274065 XPNPEP3Q9NQH7 507 aa10.26□□□□□ -0.77
RPS3A-201ENST00000274065 CXXC1Q9P0U4 656 aaPredicted RBP10.26□□□□□ -0.77
RPS3A-201ENST00000274065 HCN4Q9Y3Q4 1203 aa10.26□□□□□ -0.77
RPS3A-201ENST00000274065 LCE2BO14633 110 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 TIMP1P01033 207 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 UBTFL1P0CB47 393 aaPredicted RBP10.25□□□□□ -0.77
RPS3A-201ENST00000274065 ERCC3P19447 782 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 KCNQ1P51787 676 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 TFCP2Q12800 502 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 ANKRD33Q7Z3H0 272 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 ADGRA1Q86SQ6 560 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 LENG1Q96BZ8 264 aaPredicted RBP10.25□□□□□ -0.77
RPS3A-201ENST00000274065 SPATC1LQ9H0A9 340 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 KIAA1683Q9H0B3 1180 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 LRP2BPQ9P2M1 347 aa10.25□□□□□ -0.77
RPS3A-201ENST00000274065 MUC6Q6W4X9 2439 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 RNF223E7ERA6 249 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 STRNO43815 780 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 TLL1O43897 1013 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 ACRP10323 421 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 RARBP10826 455 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 TAL1P17542 331 aaPredicted RBP10.24□□□□□ -0.77
RPS3A-201ENST00000274065 MCAMP43121 646 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 USP14P54578 494 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 RAB3GAP1Q15042 981 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 MFSD5Q6N075 450 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 RNF180Q86T96 592 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 MICALL1Q8N3F8 863 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 SSH1Q8WYL5 1049 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 MAML3Q96JK9 1138 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 NEUROD6Q96NK8 337 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 TOX2Q96NM4 488 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 NOL10Q9BSC4 688 aaKnown RBP10.24□□□□□ -0.77
RPS3A-201ENST00000274065 NKX2-4Q9H2Z4 354 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 TBX21Q9UL17 535 aa10.24□□□□□ -0.77
RPS3A-201ENST00000274065 YBX2Q9Y2T7 364 aaKnown RBP10.24□□□□□ -0.77
RPS3A-201ENST00000274065 TCF20Q9UGU0 1960 aaKnown RBP10.24□□□□□ -0.77
RPS3A-201ENST00000274065 DCDC2CA8MYV0 355 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 BAG3O95817 575 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 HLA-DOAP06340 250 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 CSF2RAP15509 400 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 ARID4AP29374 1257 aaPredicted RBP10.23□□□□□ -0.77
RPS3A-201ENST00000274065 DYNLL1P63167 89 aaKnown RBP10.23□□□□□ -0.77
RPS3A-201ENST00000274065 PPIGQ13427 754 aaKnown RBP eCLIP10.23□□□□□ -0.77
RPS3A-201ENST00000274065 TMEM31Q5JXX7 168 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 NAA16Q6N069 864 aaPredicted RBP10.23□□□□□ -0.77
RPS3A-201ENST00000274065 TATDN1Q6P1N9 297 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 ZNF365Q70YC5 407 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 ALYREFQ86V81 257 aaKnown RBP10.23□□□□□ -0.77
RPS3A-201ENST00000274065 SHCBP1Q8NEM2 672 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 C11orf16Q9NQ32 467 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 AKAP2Q9Y2D5 859 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 ZNF236Q9UL36 1845 aa10.23□□□□□ -0.77
RPS3A-201ENST00000274065 PLXNA1Q9UIW2 1896 aa10.22□□□□□ -0.77
RPS3A-201ENST00000274065 ADAMTS4O75173 837 aa10.22□□□□□ -0.77
RPS3A-201ENST00000274065 NR1I2O75469 434 aa10.22□□□□□ -0.77
RPS3A-201ENST00000274065 FECHP22830 423 aa10.22□□□□□ -0.77
RPS3A-201ENST00000274065 COG2Q14746 738 aa10.22□□□□□ -0.77
RPS3A-201ENST00000274065 GORABQ5T7V8 394 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms