RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PSMD6Q15008 389 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 CCDC197Q8NCU1 140 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 TUBB6Q9BUF5 446 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 KIAA1468Q9P260 1216 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 GGA1Q9UJY5 639 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 PPP1R9AQ9ULJ8 1098 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 SART1O43290 800 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 ZBED4O75132 1171 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 ITGA6P23229 1130 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 PDCD2Q16342 344 aaPredicted RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 KMT5BQ4FZB7 885 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 SPATA5Q8NB90 893 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 U2AF1L4Q8WU68 220 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 METTL14Q9HCE5 456 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 STK38LQ9Y2H1 464 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 CROCC2H7BZ55 1655 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 DDAH1O94760 285 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 S100BP04271 92 aaPredicted RBP8.74□□□□□ -1.01
LIMD1-201ENST00000273317 SRGAP2BP0DMP2 458 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 ATXN8OSP0DMR3 200 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 BCL2L12Q9HB09 334 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 MYOM2P54296 1465 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 CROCCQ5TZA2 2017 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 SLC39A6Q13433 755 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 LONRF3Q496Y0 759 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 MYOCDQ8IZQ8 938 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 FAM8A1Q9UBU6 413 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 LPIN2Q92539 896 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 A0A1W2PQ27 194 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 A0A1W2PQ64 194 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 A0A1W2PQD8 194 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 BPIFB4P59827 614 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 PNOCQ13519 176 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 EFCAB13Q8IY85 973 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 EIF2AQ9BY44 585 aaKnown RBP8.74□□□□□ -1.01
LIMD1-201ENST00000273317 BAIAP2L1Q9UHR4 511 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 PPP1R12AO14974 1030 aaPredicted RBP8.74□□□□□ -1.01
LIMD1-201ENST00000273317 GAS7O60861 476 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 GUCY2FP51841 1108 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 DEUP1Q05D60 604 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 MGARPQ8TDB4 240 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 NCOA5Q9HCD5 579 aaKnown RBP8.74□□□□□ -1.01
LIMD1-201ENST00000273317 ATP8A2Q9NTI2 1148 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 PKD2L1Q9P0L9 805 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 BRD1O95696 1058 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 C10orf76Q5T2E6 689 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 GPBP1Q86WP2 473 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 NFATC2IPQ8NCF5 419 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 MRRFQ96E11 262 aaKnown RBP8.74□□□□□ -1.01
LIMD1-201ENST00000273317 NACA2Q9H009 215 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 USTQ9Y2C2 406 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 ADCY9O60503 1353 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 TTI1O43156 1089 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 PDE8AO60658 829 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 SAP30BPQ9UHR5 308 aaKnown RBP8.74□□□□□ -1.01
LIMD1-201ENST00000273317 TXKP42681 527 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 RETREG2Q8NC44 543 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 ZBTB7BO15156 539 aaPredicted RBP8.74□□□□□ -1.01
LIMD1-201ENST00000273317 CMA1P23946 247 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 HIBADHP31937 336 aaKnown RBP8.74□□□□□ -1.01
LIMD1-201ENST00000273317 LRCH2Q5VUJ6 765 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 MICAL1Q8TDZ2 1067 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 NLRP7Q8WX94 980 aa8.74□□□□□ -1.01
LIMD1-201ENST00000273317 ABCC12Q96J65 1359 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 LAMC1P11047 1609 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 ATP5JP18859 108 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 CCDC124Q96CT7 223 aaKnown RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 TRIM56Q9BRZ2 755 aaKnown RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 ARMT1Q9H993 441 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 FAF1Q9UNN5 650 aaPredicted RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 ATP10BO94823 1461 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 PFKFB1P16118 471 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 DMP1Q13316 513 aaPredicted RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 HADHQ16836 314 aaKnown RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 AP1ARQ63HQ0 302 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 CDKL2Q92772 493 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 ATICP31939 592 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 LRGUKQ96M69 825 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 FAM207AQ9NSI2 230 aaPredicted RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 LRRD1A4D1F6 860 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 PFKFB2O60825 505 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 TTC4O95801 387 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 SUPT20HQ8NEM7 779 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 KCNK3O14649 394 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 GPHNQ9NQX3 736 aaPredicted RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 ARMCX3Q9UH62 379 aaPredicted RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 KDM5CP41229 1560 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 KPNA2P52292 529 aaKnown RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 TRIM68Q6AZZ1 485 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 LRRC8CQ8TDW0 803 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 EEF1GP26641 437 aaKnown RBP8.73□□□□□ -1.01
LIMD1-201ENST00000273317 KRT26Q7Z3Y9 468 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 IFT122Q9HBG6 1241 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 CHRNA2Q15822 529 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 AOC3Q16853 763 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 EFHD1Q9BUP0 239 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 MYL1P05976 194 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 EPHB4P54760 987 aa8.73□□□□□ -1.01
LIMD1-201ENST00000273317 HOXC9P31274 260 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 SP4Q02446 784 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms