RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 MCMDC2Q4G0Z9 681 aa17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 MIS18BP1Q6P0N0 1132 aa17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 APTXQ7Z2E3 356 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 NLRP10Q86W26 655 aa17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 NUTM2AQ8IVF1 878 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 DMGDHQ9UI17 866 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 A0A1B0GTH6 734 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 EIF4E1BA6NMX2 242 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 BACH1O14867 736 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 GYPCP04921 128 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 SLC9C2Q5TAH2 1124 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 ANO1Q5XXA6 986 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 PI16Q6UXB8 463 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 PPFIBP1Q86W92 1011 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 GREM2Q9H772 168 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 HPSEQ9Y251 543 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 L3MBTL1Q9Y468 752 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 CIAO1O76071 339 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 IFIT1P09914 478 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 SCARF1Q14162 830 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 USPL1Q5W0Q7 1092 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 CCDC121Q6ZUS5 278 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 TRPC6Q9Y210 931 aa17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 REXO2Q9Y3B8 237 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-201ENST00000273062 ANKRD18BA2A2Z9 1011 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 PPP1R37O75864 691 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 SMNDC1O75940 238 aaKnown RBP eCLIP17.55■□□□□ 0.43e-7■■■■■ 27.2
CTDSP1-201ENST00000273062 FKBP4Q02790 459 aaKnown RBP eCLIP17.55■□□□□ 0.42e-6■■■■□ 22.8
CTDSP1-201ENST00000273062 ANKRD20A8PQ5CZ79 823 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 SPECC1Q5M775 1068 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 TRIM74Q86UV6 250 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 TRIM73Q86UV7 250 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 NAA15Q9BXJ9 866 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 CEP126Q9P2H0 1117 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 SLC8A1P32418 973 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 SLC7A5Q01650 507 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 TRIM28Q13263 835 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 ZIM3Q96PE6 472 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 GPR108Q9NPR9 543 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 MAN1B1Q9UKM7 699 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 SAR1BQ9Y6B6 198 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 LRP6O75581 1613 aa17.55■□□□□ 0.4
CTDSP1-201ENST00000273062 E7EVH7 732 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 BUB1BO60566 1050 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 KRT32Q14532 448 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 RAB11FIP4Q86YS3 637 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 GRAMD1CQ8IYS0 662 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 CYFIP2Q96F07 1278 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 ZNF570Q96NI8 536 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 ZCWPW1Q9H0M4 648 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 NOD2Q9HC29 1040 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 BAIAP2L1Q9UHR4 511 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 TULP1O00294 542 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 EPB41P11171 864 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 DRAXINQ8NBI3 349 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 AIDAQ96BJ3 306 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 HOOK2Q96ED9 719 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 SEC31BQ9NQW1 1179 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 UBN2Q6ZU65 1347 aa17.54■□□□□ 0.4
CTDSP1-201ENST00000273062 AHDC1Q5TGY3 1603 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 GOLGA6L7A0A1B0GV03 622 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 MGRN1O60291 552 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 ATP6V1G2O95670 118 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 CSF1RP07333 972 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 FAM163BP0C2L3 166 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 ITGA6P23229 1130 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 SCTRP47872 440 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 PPARAQ07869 468 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 QPCTQ16769 361 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 CCDC50Q8IVM0 306 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 PPANQ9NQ55 473 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 LMCD1Q9NZU5 365 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 DOT1LQ8TEK3 1739 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 M0R2C6 588 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 OPA1O60313 960 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 DZIP3Q86Y13 1208 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 TTLL11Q8NHH1 800 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 PALLDQ8WX93 1383 aa17.53■□□□□ 0.4
CTDSP1-201ENST00000273062 FAM107AO95990 144 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 PBX1P40424 430 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 USP4Q13107 963 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 KDM7AQ6ZMT4 941 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 SYNE3Q6ZMZ3 975 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 NFXL1Q6ZNB6 911 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 CAGE1Q8TC20 777 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 LRRC1Q9BTT6 524 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 MAST3O60307 1309 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 SH3TC1Q8TE82 1336 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 PLCH1Q4KWH8 1693 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 ZNF233A6NK53 670 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 PIK3R5Q8WYR1 880 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 JAKMIP2Q96AA8 810 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 SPAG5Q96R06 1193 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 CHP1Q99653 195 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms