RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 HOOK1Q9UJC3 728 aaKnown RBP9.98□□□□□ -0.81
TRIM43-201ENST00000272395 SLC12A7Q9Y666 1083 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 CCDC196A0A1B0GTZ2 297 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 USP17L12C9JPN9 530 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 USP17L21D6R901 530 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 CCP110O43303 1012 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 CBFA2T2O43439 604 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 PPFIA3O75145 1194 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 USP2O75604 605 aaPredicted RBP9.97□□□□□ -0.81
TRIM43-201ENST00000272395 SAFBQ15424 915 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRIM43-201ENST00000272395 CTR9Q6PD62 1173 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 MFSD6Q6ZSS7 791 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 NBPF11Q86T75 865 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 TRIM22Q8IYM9 498 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 CCAR2Q8N163 923 aaKnown RBP9.97□□□□□ -0.81
TRIM43-201ENST00000272395 STK11IPQ8N1F8 1099 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 C2orf69Q8N8R5 385 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 RNF41Q9H4P4 317 aaPredicted RBP9.97□□□□□ -0.81
TRIM43-201ENST00000272395 ATP8A2Q9NTI2 1148 aa9.97□□□□□ -0.81
TRIM43-201ENST00000272395 ABT1Q9ULW3 272 aaKnown RBP9.97□□□□□ -0.81
TRIM43-201ENST00000272395 MORC2Q9Y6X9 1032 aaPredicted RBP9.97□□□□□ -0.81
TRIM43-201ENST00000272395 IFIT3O14879 490 aaKnown RBP9.96□□□□□ -0.81
TRIM43-201ENST00000272395 CDC27P30260 824 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 TDO2P48775 406 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 NCAPHQ15003 741 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 FILIP1Q7Z7B0 1213 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 MICU3Q86XE3 530 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 SLC44A5Q8NCS7 719 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 STAG1Q8WVM7 1258 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 DYNLL2Q96FJ2 89 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 CLMNQ96JQ2 1002 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 FEZ1Q99689 392 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.81
TRIM43-201ENST00000272395 FOXP1Q9H334 677 aaPredicted RBP9.96□□□□□ -0.81
TRIM43-201ENST00000272395 DNAJC18Q9H819 358 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 FAM217BQ9NTX9 383 aaPredicted RBP9.96□□□□□ -0.81
TRIM43-201ENST00000272395 ZSWIM5Q9P217 1185 aa9.96□□□□□ -0.81
TRIM43-201ENST00000272395 COL2A1P02458 1487 aaPredicted RBP9.96□□□□□ -0.81
TRIM43-201ENST00000272395 POLR2AP24928 1970 aaKnown RBP9.96□□□□□ -0.81
TRIM43-201ENST00000272395 ERICH2A1L162 156 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 MINDY4BA8MYZ0 360 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 PPP1R12BO60237 982 aaPredicted RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 HLA-DOAP06340 250 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 HSPA6P17066 643 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 SFPQP23246 707 aaKnown RBP eCLIP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 HUNKP57058 714 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 MYL5Q02045 173 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 RRP1BQ14684 758 aaKnown RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 SHROOM1Q2M3G4 852 aaPredicted RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 SHC4Q6S5L8 630 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 SAPCD2Q86UD0 394 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 RAB11FIP4Q86YS3 637 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 NOSTRINQ8IVI9 506 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 CRACR2BQ8N4Y2 399 aaPredicted RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 KIF18AQ8NI77 898 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 ZKSCAN4Q969J2 545 aaPredicted RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 WRNIP1Q96S55 665 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 XPO4Q9C0E2 1151 aaKnown RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 DHX36Q9H2U1 1008 aaKnown RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 CREBZFQ9NS37 354 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 GJB4Q9NTQ9 266 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 IFNKQ9P0W0 207 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 CGNQ9P2M7 1197 aaKnown RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.96□□□□□ -0.82
TRIM43-201ENST00000272395 PI4KBQ9UBF8 816 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 TLL2Q9Y6L7 1015 aa9.96□□□□□ -0.82
TRIM43-201ENST00000272395 PHF20L1A8MW92 1017 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 RANBP6O60518 1105 aaKnown RBP9.95□□□□□ -0.82
TRIM43-201ENST00000272395 SMC2O95347 1197 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 DEXIO95424 95 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 MMP1P03956 469 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 MARCKSP29966 332 aaPredicted RBP9.95□□□□□ -0.82
TRIM43-201ENST00000272395 INPP5BP32019 993 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 NCBP1Q09161 790 aaKnown RBP9.95□□□□□ -0.82
TRIM43-201ENST00000272395 RTN1Q16799 776 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 RILPL1Q5EBL4 403 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 C12orf60Q5U649 245 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 DCAF15Q66K64 600 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 ARMC9Q7Z3E5 817 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 ZNF579Q8NAF0 562 aaKnown RBP9.95□□□□□ -0.82
TRIM43-201ENST00000272395 TSC1Q92574 1164 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 PHKBQ93100 1093 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 KLRG1Q96E93 195 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 AIFM3Q96NN9 605 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 SLC26A6Q9BXS9 759 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 ZNF341Q9BYN7 854 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 ANAPC4Q9UJX5 808 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 KCNH3Q9ULD8 1083 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 CEP131Q9UPN4 1083 aa9.95□□□□□ -0.82
TRIM43-201ENST00000272395 DDX60LQ5H9U9 1706 aaKnown RBP9.94□□□□□ -0.82
TRIM43-201ENST00000272395 PCP11498 1178 aaKnown RBP9.94□□□□□ -0.82
TRIM43-201ENST00000272395 IREB2P48200 963 aaKnown RBP9.94□□□□□ -0.82
TRIM43-201ENST00000272395 JAG1P78504 1218 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 FANCCQ00597 558 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 GRM1Q13255 1194 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 VGLL4Q14135 290 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 ARID5BQ14865 1188 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 WTAPQ15007 396 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms