RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 WDR59Q6PJI9 974 aa30.91■■■□□ 2.54
CBX4-201ENST00000269397 MB21D1Q8N884 522 aa30.91■■■□□ 2.54
CBX4-201ENST00000269397 RIOK1Q9BRS2 568 aaKnown RBP30.91■■■□□ 2.54
CBX4-201ENST00000269397 STAT6P42226 847 aa30.9■■■□□ 2.54
CBX4-201ENST00000269397 ARAP2Q8WZ64 1704 aa30.9■■■□□ 2.54
CBX4-201ENST00000269397 STRCP1A6NGW2 1772 aa30.9■■■□□ 2.54
CBX4-201ENST00000269397 RNF40O75150 1001 aa30.9■■■□□ 2.54
CBX4-201ENST00000269397 USP14P54578 494 aa30.9■■■□□ 2.54
CBX4-201ENST00000269397 MSL3Q8N5Y2 521 aaKnown RBP30.9■■■□□ 2.54
CBX4-201ENST00000269397 RASGRP4Q8TDF6 673 aa30.9■■■□□ 2.54
CBX4-201ENST00000269397 SLC4A8Q2Y0W8 1093 aa30.89■■■□□ 2.54
CBX4-201ENST00000269397 SAR1BQ9Y6B6 198 aa30.89■■■□□ 2.54
CBX4-201ENST00000269397 DCCP43146 1447 aa30.89■■■□□ 2.54
CBX4-201ENST00000269397 RASSF8Q8NHQ8 419 aa30.89■■■□□ 2.53
CBX4-201ENST00000269397 ANKRD36CQ5JPF3 1778 aa30.89■■■□□ 2.53
CBX4-201ENST00000269397 A0A0G2JS52 829 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 ERVV-1B6SEH8 477 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 USP17L12C9JPN9 530 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 USP17L21D6R901 530 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 CTCFLQ8NI51 663 aaPredicted RBP30.88■■■□□ 2.53
CBX4-201ENST00000269397 LRP5O75197 1615 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 PSMD14O00487 310 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 ZNF185O15231 689 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 IVLP07476 585 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 SCG2P13521 617 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 LRRC31Q6UY01 552 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 HAUS4Q9H6D7 363 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 AGPAT5Q9NUQ2 364 aa30.88■■■□□ 2.53
CBX4-201ENST00000269397 GNL3LQ9NVN8 582 aaKnown RBP30.88■■■□□ 2.53
CBX4-201ENST00000269397 RCCD1A6NED2 376 aa30.87■■■□□ 2.53
CBX4-201ENST00000269397 SYF2O95926 243 aaKnown RBP30.87■■■□□ 2.53
CBX4-201ENST00000269397 KLK7P49862 253 aa30.87■■■□□ 2.53
CBX4-201ENST00000269397 KIAA1328Q86T90 577 aa30.87■■■□□ 2.53
CBX4-201ENST00000269397 RMND1Q9NWS8 449 aa30.87■■■□□ 2.53
CBX4-201ENST00000269397 MYH13Q9UKX3 1938 aa30.87■■■□□ 2.53
CBX4-201ENST00000269397 DUSP10Q9Y6W6 482 aa30.87■■■□□ 2.53
CBX4-201ENST00000269397 H7C1D1 291 aa30.87■■■□□ 2.53
CBX4-201ENST00000269397 GPKOWQ92917 476 aaPredicted RBP eCLIP30.87■■■□□ 2.532e-6■■■□□ 16
CBX4-201ENST00000269397 LACRTQ9GZZ8 138 aa30.87■■■□□ 2.53
CBX4-201ENST00000269397 B4DLN1 442 aa30.86■■■□□ 2.53
CBX4-201ENST00000269397 CTR9Q6PD62 1173 aa30.86■■■□□ 2.53
CBX4-201ENST00000269397 ACBD3Q9H3P7 528 aa30.86■■■□□ 2.53
CBX4-201ENST00000269397 LGALS16A8MUM7 142 aa30.86■■■□□ 2.53
CBX4-201ENST00000269397 TSR1Q2NL82 804 aaKnown RBP30.86■■■□□ 2.53
CBX4-201ENST00000269397 ADSSL1Q8N142 457 aa30.86■■■□□ 2.53
CBX4-201ENST00000269397 FAM205AQ6ZU69 1335 aa30.85■■■□□ 2.53
CBX4-201ENST00000269397 TRIM47Q96LD4 638 aa30.85■■■□□ 2.53
CBX4-201ENST00000269397 DNAJC7Q99615 494 aa30.85■■■□□ 2.53
CBX4-201ENST00000269397 MED4Q9NPJ6 270 aa30.85■■■□□ 2.53
CBX4-201ENST00000269397 CALM1P0DP23 149 aa30.85■■■□□ 2.53
CBX4-201ENST00000269397 CALM2P0DP24 149 aa30.85■■■□□ 2.53
CBX4-201ENST00000269397 CALM3P0DP25 149 aa30.85■■■□□ 2.53
CBX4-201ENST00000269397 CCDC152Q4G0S7 254 aa30.85■■■□□ 2.53
CBX4-201ENST00000269397 MYBL2P10244 700 aa30.84■■■□□ 2.53
CBX4-201ENST00000269397 IL6STP40189 918 aaPredicted RBP30.84■■■□□ 2.53
CBX4-201ENST00000269397 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.84■■■□□ 2.53
CBX4-201ENST00000269397 ZNF384Q8TF68 577 aa30.84■■■□□ 2.53
CBX4-201ENST00000269397 JAKMIP2Q96AA8 810 aa30.84■■■□□ 2.53
CBX4-201ENST00000269397 DUOX1Q9NRD9 1551 aa30.84■■■□□ 2.53
CBX4-201ENST00000269397 TUBBP07437 444 aa30.84■■■□□ 2.53
CBX4-201ENST00000269397 CYP27A1Q02318 531 aa30.84■■■□□ 2.53
CBX4-201ENST00000269397 HPCAL4Q9UM19 191 aa30.84■■■□□ 2.53
CBX4-201ENST00000269397 PLCH1Q4KWH8 1693 aa30.84■■■□□ 2.53
CBX4-201ENST00000269397 NAALADL2Q58DX5 795 aa30.83■■■□□ 2.53
CBX4-201ENST00000269397 ZNF507Q8TCN5 953 aa30.83■■■□□ 2.53
CBX4-201ENST00000269397 CAPN11Q9UMQ6 739 aa30.83■■■□□ 2.53
CBX4-201ENST00000269397 DDAH1O94760 285 aa30.83■■■□□ 2.53
CBX4-201ENST00000269397 CAGE1Q8TC20 777 aa30.83■■■□□ 2.53
CBX4-201ENST00000269397 MACROD2A1Z1Q3 448 aa30.82■■■□□ 2.52
CBX4-201ENST00000269397 PDE2AO00408 941 aaPredicted RBP30.82■■■□□ 2.52
CBX4-201ENST00000269397 EIF5P55010 431 aaKnown RBP30.82■■■□□ 2.52
CBX4-201ENST00000269397 C4orf32Q8N8J7 132 aa30.82■■■□□ 2.52
CBX4-201ENST00000269397 DISC1Q9NRI5 854 aa30.82■■■□□ 2.52
CBX4-201ENST00000269397 CYP2D6P10635 497 aa30.81■■■□□ 2.52
CBX4-201ENST00000269397 TRIM21P19474 475 aaKnown RBP30.81■■■□□ 2.52
CBX4-201ENST00000269397 GOLGA6L1Q8N7Z2 621 aa30.81■■■□□ 2.52
CBX4-201ENST00000269397 CICQ96RK0 1608 aaPredicted RBP30.81■■■□□ 2.52
CBX4-201ENST00000269397 ITGB4P16144 1822 aa30.81■■■□□ 2.52
CBX4-201ENST00000269397 COL1A1P02452 1464 aaPredicted RBP30.81■■■□□ 2.52
CBX4-201ENST00000269397 PFKFB3Q16875 520 aaPredicted RBP30.81■■■□□ 2.52
CBX4-201ENST00000269397 GPIHBP1Q8IV16 184 aa30.81■■■□□ 2.52
CBX4-201ENST00000269397 AFAP1L1Q8TED9 768 aa30.81■■■□□ 2.52
CBX4-201ENST00000269397 TRAPPC10P48553 1259 aa30.81■■■□□ 2.52
CBX4-201ENST00000269397 PAPD7Q5XG87 772 aaKnown RBP30.81■■■□□ 2.52
CBX4-201ENST00000269397 RPS6KA5O75582 802 aa30.8■■■□□ 2.52
CBX4-201ENST00000269397 LONP1P36776 959 aaKnown RBP30.8■■■□□ 2.52
CBX4-201ENST00000269397 GGCXP38435 758 aa30.8■■■□□ 2.52
CBX4-201ENST00000269397 C2orf54Q08AI8 447 aa30.8■■■□□ 2.52
CBX4-201ENST00000269397 PCMTD1Q96MG8 357 aaPredicted RBP30.8■■■□□ 2.52
CBX4-201ENST00000269397 PYM1Q9BRP8 204 aaKnown RBP30.8■■■□□ 2.52
CBX4-201ENST00000269397 TMEM60Q9H2L4 133 aa30.8■■■□□ 2.52
CBX4-201ENST00000269397 JADE2Q9NQC1 790 aa30.8■■■□□ 2.52
CBX4-201ENST00000269397 MAGEC2Q9UBF1 373 aaPredicted RBP30.8■■■□□ 2.52
CBX4-201ENST00000269397 PRPF6O94906 941 aaKnown RBP30.8■■■□□ 2.52
CBX4-201ENST00000269397 MRPS25P82663 173 aaKnown RBP30.8■■■□□ 2.52
CBX4-201ENST00000269397 MTMR7Q9Y216 660 aa30.8■■■□□ 2.52
CBX4-201ENST00000269397 DISP2A7MBM2 1401 aa30.79■■■□□ 2.52
CBX4-201ENST00000269397 BCL9O00512 1426 aa30.79■■■□□ 2.52
CBX4-201ENST00000269397 PDS5AQ29RF7 1337 aaKnown RBP30.79■■■□□ 2.52
CBX4-201ENST00000269397 COL4A1P02462 1669 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms