RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 GOLPH3LQ9H4A5 285 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 VAT1LQ9HCJ6 419 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 ESYT2A0FGR8 921 aa18.78■□□□□ 0.6
TPM1-201ENST00000267996 PHF20L1A8MW92 1017 aa18.78■□□□□ 0.6
TPM1-201ENST00000267996 NDUFB10O96000 172 aa18.78■□□□□ 0.6
TPM1-201ENST00000267996 SLC1A4P43007 532 aa18.78■□□□□ 0.6
TPM1-201ENST00000267996 TRAPPC10P48553 1259 aa18.78■□□□□ 0.6
TPM1-201ENST00000267996 KCTD1Q719H9 257 aa18.78■□□□□ 0.6
TPM1-201ENST00000267996 HOMER1Q86YM7 354 aa18.78■□□□□ 0.6
TPM1-201ENST00000267996 PCDHB6Q9Y5E3 794 aa18.78■□□□□ 0.6
TPM1-201ENST00000267996 PNMA6FA0A0J9YX94 578 aa18.77■□□□□ 0.6
TPM1-201ENST00000267996 CMA1P23946 247 aa18.77■□□□□ 0.6
TPM1-201ENST00000267996 SNW1Q13573 536 aaKnown RBP18.77■□□□□ 0.6
TPM1-201ENST00000267996 NOM1Q5C9Z4 860 aaKnown RBP18.77■□□□□ 0.6
TPM1-201ENST00000267996 FSIP1Q8NA03 581 aa18.77■□□□□ 0.6
TPM1-201ENST00000267996 TRPM4Q8TD43 1214 aa18.77■□□□□ 0.6
TPM1-201ENST00000267996 MRPS27Q92552 414 aaKnown RBP18.77■□□□□ 0.6
TPM1-201ENST00000267996 DEFB129Q9H1M3 183 aa18.77■□□□□ 0.6
TPM1-201ENST00000267996 CLSTN2Q9H4D0 955 aa18.77■□□□□ 0.6
TPM1-201ENST00000267996 NOL7Q9UMY1 257 aaKnown RBP18.77■□□□□ 0.6
TPM1-201ENST00000267996 TMX2Q9Y320 296 aa18.77■□□□□ 0.6
TPM1-201ENST00000267996 TRIM75PA6NK02 468 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 MARCKSP29966 332 aaPredicted RBP18.76■□□□□ 0.59
TPM1-201ENST00000267996 NAPAP54920 295 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 FAM160A1Q05DH4 1040 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 L1TD1Q5T7N2 865 aaKnown RBP18.76■□□□□ 0.59
TPM1-201ENST00000267996 RBM43Q6ZSC3 357 aaKnown RBP18.76■□□□□ 0.59
TPM1-201ENST00000267996 APOBEC3FQ8IUX4 373 aaKnown RBP18.76■□□□□ 0.59
TPM1-201ENST00000267996 NUP62CLQ9H1M0 184 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 ARHGEF10LQ9HCE6 1279 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 GINM1Q9NU53 330 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 CEP131Q9UPN4 1083 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 FAM237AA0A1B0GTK4 181 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 CUTAO60888 179 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 ASNSP08243 561 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 MRE11P49959 708 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 CCDC73Q6ZRK6 1079 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 PCDHA6Q9UN73 950 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 SCAF8Q9UPN6 1271 aaKnown RBP18.76■□□□□ 0.59
TPM1-201ENST00000267996 PCDHA8Q9Y5H6 950 aa18.76■□□□□ 0.59
TPM1-201ENST00000267996 BMP15O95972 392 aa18.75■□□□□ 0.59
TPM1-201ENST00000267996 PTPREP23469 700 aa18.75■□□□□ 0.59
TPM1-201ENST00000267996 SLC16A2P36021 539 aa18.75■□□□□ 0.59
TPM1-201ENST00000267996 PPP1R18Q6NYC8 613 aa18.75■□□□□ 0.59
TPM1-201ENST00000267996 BTNL9Q6UXG8 535 aa18.75■□□□□ 0.59
TPM1-201ENST00000267996 PIK3AP1Q6ZUJ8 805 aa18.75■□□□□ 0.59
TPM1-201ENST00000267996 FMR1NBQ8N0W7 255 aaPredicted RBP18.75■□□□□ 0.59
TPM1-201ENST00000267996 ACER1Q8TDN7 264 aa18.75■□□□□ 0.59
TPM1-201ENST00000267996 C6orf50Q9HD87 102 aa18.75■□□□□ 0.59
TPM1-201ENST00000267996 RNF181Q9P0P0 153 aa18.75■□□□□ 0.59
TPM1-201ENST00000267996 SMCO2A6NFE2 343 aa18.74■□□□□ 0.59
TPM1-201ENST00000267996 USP17L10C9JJH3 530 aa18.74■□□□□ 0.59
TPM1-201ENST00000267996 ZBTB5O15062 677 aa18.74■□□□□ 0.59
TPM1-201ENST00000267996 PPP1R11O60927 126 aaPredicted RBP18.74■□□□□ 0.59
TPM1-201ENST00000267996 GNA11P29992 359 aa18.74■□□□□ 0.59
TPM1-201ENST00000267996 EPS15P42566 896 aa18.74■□□□□ 0.59
TPM1-201ENST00000267996 HIRAP54198 1017 aaPredicted RBP18.74■□□□□ 0.59
TPM1-201ENST00000267996 TTC38Q5R3I4 469 aa18.74■□□□□ 0.59
TPM1-201ENST00000267996 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
TPM1-201ENST00000267996 FUCA2Q9BTY2 467 aa18.74■□□□□ 0.59
TPM1-201ENST00000267996 GRPEL1Q9HAV7 217 aa18.74■□□□□ 0.59
TPM1-201ENST00000267996 FBXO2Q9UK22 296 aaPredicted RBP18.74■□□□□ 0.59
TPM1-201ENST00000267996 WNT7AO00755 349 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 BMP3P12645 472 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 ECE1P42892 770 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 ANGEL2Q5VTE6 544 aaKnown RBP18.73■□□□□ 0.59
TPM1-201ENST00000267996 SHC4Q6S5L8 630 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 SRPRBQ9Y5M8 271 aaKnown RBP18.73■□□□□ 0.59
TPM1-201ENST00000267996 A0A1B0GVL5 298 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 DDNO94850 711 aaPredicted RBP18.73■□□□□ 0.59
TPM1-201ENST00000267996 ATP2B1P20020 1258 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 NDUFA8P51970 172 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 MAP3K11Q16584 847 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 NBPF12Q5TAG4 269 aaPredicted RBP18.73■□□□□ 0.59
TPM1-201ENST00000267996 RESP18Q5W5W9 173 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 ZNF579Q8NAF0 562 aaKnown RBP18.73■□□□□ 0.59
TPM1-201ENST00000267996 RASGRP4Q8TDF6 673 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 GOPCQ9HD26 462 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 HPSEQ9Y251 543 aa18.73■□□□□ 0.59
TPM1-201ENST00000267996 ATAD5Q96QE3 1844 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 CTNND1O60716 968 aaKnown RBP18.72■□□□□ 0.59
TPM1-201ENST00000267996 KIAA1755Q5JYT7 1200 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 C9orf131Q5VYM1 1079 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 KRT25Q7Z3Z0 450 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 COA7Q96BR5 231 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 NUP88Q99567 741 aaPredicted RBP18.72■□□□□ 0.59
TPM1-201ENST00000267996 TNMDQ9H2S6 317 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 TSPY26PQ9H489 355 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 SH2D4AQ9H788 454 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 VCPKMTQ9H867 229 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 ZNF112Q9UJU3 913 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 PPP2R3BQ9Y5P8 575 aa18.72■□□□□ 0.59
TPM1-201ENST00000267996 CCDC194A0A1B0GVG4 234 aa18.71■□□□□ 0.59
TPM1-201ENST00000267996 CTAGE5O15320 804 aa18.71■□□□□ 0.59
TPM1-201ENST00000267996 RAD21O60216 631 aa18.71■□□□□ 0.59
TPM1-201ENST00000267996 XRCC6P12956 609 aaKnown RBP eCLIP18.71■□□□□ 0.59
TPM1-201ENST00000267996 QRICH1Q2TAL8 776 aa18.71■□□□□ 0.59
TPM1-201ENST00000267996 SYDE2Q5VT97 1194 aa18.71■□□□□ 0.59
TPM1-201ENST00000267996 DCAF15Q66K64 600 aa18.71■□□□□ 0.59
TPM1-201ENST00000267996 HOOK2Q96ED9 719 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms