RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CDC42BPBQ9Y5S2 1711 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 ABCA6Q8N139 1617 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 SOS2Q07890 1332 aaPredicted RBP15.51■□□□□ 0.07
CDH3-201ENST00000264012 RPN1P04843 607 aaKnown RBP15.51■□□□□ 0.07
CDH3-201ENST00000264012 IVLP07476 585 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 RDH13Q8NBN7 331 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 SELENOSQ9BQE4 189 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 RCOR1Q9UKL0 485 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 MED14O60244 1454 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 TESPA1A2RU30 521 aaPredicted RBP15.51■□□□□ 0.07
CDH3-201ENST00000264012 BCRP11274 1271 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 ELF2Q15723 593 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 BRDTQ58F21 947 aaPredicted RBP15.51■□□□□ 0.07
CDH3-201ENST00000264012 SPATA1Q5VX52 437 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 AS3MTQ9HBK9 375 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 ASPRV1Q53RT3 343 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 LRRC45Q96CN5 670 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 IFIH1Q9BYX4 1025 aaKnown RBP15.51■□□□□ 0.07
CDH3-201ENST00000264012 SWAP70Q9UH65 585 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 DNM2P50570 870 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 DIXDC1Q155Q3 683 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 DCAF15Q66K64 600 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 LINC00301Q8NCQ3 95 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 RASGRP4Q8TDF6 673 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 PSMB7Q99436 277 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 CYP2D7A0A087X1C5 515 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 STAMBPO95630 424 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 XRCC5P13010 732 aaKnown RBP15.5■□□□□ 0.07
CDH3-201ENST00000264012 LIFRP42702 1097 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 KRT27Q7Z3Y8 459 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 SERPINB13Q9UIV8 391 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 DBNDD1Q9H9R9 158 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 PCDHA4Q9UN74 947 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 NR5A1Q13285 461 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 AMNQ9BXJ7 453 aa15.5■□□□□ 0.07
CDH3-201ENST00000264012 ZEB2O60315 1214 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 TTLL1O95922 423 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 FOSP01100 380 aaPredicted RBP15.49■□□□□ 0.07
CDH3-201ENST00000264012 USP17L8P0C7I0 530 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 GNPTABQ3T906 1256 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 CDAN1Q8IWY9 1227 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 UBL4BQ8N7F7 174 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 UBLCP1Q8WVY7 318 aaPredicted RBP15.49■□□□□ 0.07
CDH3-201ENST00000264012 STRBPQ96SI9 672 aaKnown RBP15.49■□□□□ 0.07
CDH3-201ENST00000264012 SLC39A2Q9NP94 309 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 CSADQ9Y600 493 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 LRRC7Q96NW7 1537 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 CEP104O60308 925 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 MMP1P03956 469 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 MECOMQ03112 1051 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 GRAPQ13588 217 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 OTUD6AQ7L8S5 288 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 GRAPLQ8TC17 118 aaPredicted RBP15.49■□□□□ 0.07
CDH3-201ENST00000264012 CSRNP1Q96S65 589 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 IWS1Q96ST2 819 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 PANK4Q9NVE7 773 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 FAM26FQ5R3K3 315 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 PLA2G4DQ86XP0 818 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 TICAM2Q86XR7 235 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 GSDMAQ96QA5 445 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 ARMCX3Q9UH62 379 aaPredicted RBP15.49■□□□□ 0.07
CDH3-201ENST00000264012 SETBP1Q9Y6X0 1596 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 CYP2J2P51589 502 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 ARHGAP44Q17R89 818 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 ARHGEF16Q5VV41 709 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 DESI2Q9BSY9 194 aa15.49■□□□□ 0.07
CDH3-201ENST00000264012 LSM14BQ9BX40 385 aaKnown RBP15.49■□□□□ 0.07
CDH3-201ENST00000264012 CLRN2A0PK11 232 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 SYNE4Q8N205 404 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 GPHNQ9NQX3 736 aaPredicted RBP15.48■□□□□ 0.07
CDH3-201ENST00000264012 E9PCH4 1651 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 RPS6KA4O75676 772 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 NBPF11Q86T75 865 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 SPICE1Q8N0Z3 855 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 TDRD7Q8NHU6 1098 aaKnown RBP15.48■□□□□ 0.07
CDH3-201ENST00000264012 FAM76AQ8TAV0 307 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 MAK16Q9BXY0 300 aaKnown RBP15.48■□□□□ 0.07
CDH3-201ENST00000264012 KCNG1Q9UIX4 513 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 LAD1O00515 517 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 CA8P35219 290 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 SEPT12Q8IYM1 358 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 GLG1Q92896 1179 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 DYNLL2Q96FJ2 89 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 TTC14Q96N46 770 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 QRICH2Q9H0J4 1663 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 MAP3K9P80192 1104 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 SLFNL1Q499Z3 407 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 SREK1Q8WXA9 508 aaKnown RBP15.48■□□□□ 0.07
CDH3-201ENST00000264012 AGTPBP1Q9UPW5 1226 aa15.48■□□□□ 0.07
CDH3-201ENST00000264012 ABCA9Q8IUA7 1624 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 SNAP23O00161 211 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 ACTN4O43707 911 aaKnown RBP15.47■□□□□ 0.07
CDH3-201ENST00000264012 CYP4A11Q02928 519 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 GABPB1Q06547 395 aaPredicted RBP15.47■□□□□ 0.07
CDH3-201ENST00000264012 RESTQ13127 1097 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 MCF2L2Q86YR7 1114 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 LRRC8AQ8IWT6 810 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 GIMAP7Q8NHV1 300 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms