RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 HPS5Q9UPZ3 1129 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 PRKAB2O43741 272 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 GPSM2P81274 684 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 PDIA5Q14554 519 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 RETREG2Q8NC44 543 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 FAM151AQ8WW52 585 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 NUP58Q9BVL2 599 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 TSPYL1Q9H0U9 437 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 STRCQ7RTU9 1775 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 MARF1Q9Y4F3 1742 aaKnown RBP9.23□□□□□ -0.93
PTPN3-201ENST00000262539 PSMD2Q13200 908 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 HEATR3Q7Z4Q2 680 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
PTPN3-201ENST00000262539 ZNF397Q8NF99 534 aaPredicted RBP9.23□□□□□ -0.93
PTPN3-201ENST00000262539 BICD1Q96G01 975 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 TMEM47Q9BQJ4 181 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 OSBPL5Q9H0X9 879 aaPredicted RBP9.23□□□□□ -0.93
PTPN3-201ENST00000262539 ZNF408Q9H9D4 720 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 CCDC172P0C7W6 258 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 RPL13P26373 211 aaKnown RBP9.23□□□□□ -0.93
PTPN3-201ENST00000262539 EDEM3Q9BZQ6 932 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 LRWD1Q9UFC0 647 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 SLFN13Q68D06 897 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 PHF20Q9BVI0 1012 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 MAP3K20Q9NYL2 800 aaKnown RBP9.23□□□□□ -0.93
PTPN3-201ENST00000262539 PNMA6FA0A0J9YX94 578 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 F8W031 263 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 H0YCG3 227 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 H7C1D1 291 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 CETN1Q12798 172 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 POSTNQ15063 836 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 CERKLQ49MI3 558 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 CHST3Q7LGC8 479 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 FAM83AQ86UY5 434 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 CTNNBL1Q8WYA6 563 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 MXD3Q9BW11 206 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 PUF60Q9UHX1 559 aaKnown RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 ZNRF3Q9ULT6 936 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 NEDD4P46934 1319 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 EEF1GP26641 437 aaKnown RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 TAF12Q16514 161 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 ARHGAP6O43182 974 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 TAF4BQ92750 862 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 FAM20AQ96MK3 541 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 RTFDC1Q9BY42 306 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 GOPCQ9HD26 462 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 BARHL2Q9NY43 387 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 PHLPP1O60346 1717 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 RESP18Q5W5W9 173 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 ENGASEQ8NFI3 743 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 DHTKD1Q96HY7 919 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 PALM3A6NDB9 673 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 ZNF75DP51815 510 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 CIAPIN1Q6FI81 312 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 IQCEQ6IPM2 695 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 SV2BQ7L1I2 683 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 CCDC91Q7Z6B0 441 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 VPS36Q86VN1 386 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 KIF18AQ8NI77 898 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 WDR11Q9BZH6 1224 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 DNAJC25Q9H1X3 360 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 VAT1LQ9HCJ6 419 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 RIC8AQ9NPQ8 531 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 EXOC1Q9NV70 894 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 GNA14O95837 355 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 USP11P51784 963 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 ATP2C1P98194 919 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 LPAR1Q92633 364 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 CDHR1Q96JP9 859 aa9.22□□□□□ -0.93
PTPN3-201ENST00000262539 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
PTPN3-201ENST00000262539 C10orf71Q711Q0 1435 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 RASA1P20936 1047 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 FAM193AP78312 1265 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 ABCB5Q2M3G0 1257 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 KIAA1328Q86T90 577 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 TAOK3Q9H2K8 898 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 ABCB11O95342 1321 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 FLT1P17948 1338 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 SMCO2A6NFE2 343 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 DYNLL1P63167 89 aaKnown RBP9.21□□□□□ -0.93
PTPN3-201ENST00000262539 KCNB1Q14721 858 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 SPATA1Q5VX52 437 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 GOLGA5Q8TBA6 731 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 VEZTQ9HBM0 779 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 MTMR4Q9NYA4 1195 aa9.21□□□□□ -0.93
PTPN3-201ENST00000262539 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.94
PTPN3-201ENST00000262539 CYB5R4Q7L1T6 521 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 CCDC65Q8IXS2 484 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 PHKBQ93100 1093 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 ZMYND12Q9H0C1 365 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 PHLPP2Q6ZVD8 1323 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 USP17L8P0C7I0 530 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 DDR1Q08345 913 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 POTEB2H3BUK9 544 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 GADD45BO75293 160 aaPredicted RBP9.21□□□□□ -0.94
PTPN3-201ENST00000262539 CTNNA2P26232 953 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 ALCAMQ13740 583 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 CCDC82Q8N4S0 544 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 SPC24Q8NBT2 197 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 PPP2R3BQ9Y5P8 575 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms