RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 WDR59Q6PJI9 974 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 TMTC3Q6ZXV5 915 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 BRINP3Q76B58 766 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 TRAPPC11Q7Z392 1133 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 MB21D1Q8N884 522 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 LACRTQ9GZZ8 138 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 B4DLN1 442 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 CAGE1Q8TC20 777 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 PAPPAQ13219 1627 aa20.18■□□□□ 0.82
TRAF4-201ENST00000262395 USP14P54578 494 aa20.18■□□□□ 0.82
TRAF4-201ENST00000262395 SPAG1Q07617 926 aa20.18■□□□□ 0.82
TRAF4-201ENST00000262395 TRIM47Q96LD4 638 aa20.18■□□□□ 0.82
TRAF4-201ENST00000262395 PCMTD1Q96MG8 357 aaPredicted RBP20.18■□□□□ 0.82
TRAF4-201ENST00000262395 SAR1BQ9Y6B6 198 aa20.18■□□□□ 0.82
TRAF4-201ENST00000262395 MYH3P11055 1940 aa20.18■□□□□ 0.82
TRAF4-201ENST00000262395 CNTNAP5Q8WYK1 1306 aa20.18■□□□□ 0.82
TRAF4-201ENST00000262395 SYF2O95926 243 aaKnown RBP20.18■□□□□ 0.82
TRAF4-201ENST00000262395 IGHMBP2P38935 993 aaKnown RBP20.18■□□□□ 0.82
TRAF4-201ENST00000262395 ZNF34Q8IZ26 560 aa20.18■□□□□ 0.82
TRAF4-201ENST00000262395 DRC1Q96MC2 740 aa20.18■□□□□ 0.82
TRAF4-201ENST00000262395 BMP15O95972 392 aa20.17■□□□□ 0.82
TRAF4-201ENST00000262395 TSR1Q2NL82 804 aaKnown RBP20.17■□□□□ 0.82
TRAF4-201ENST00000262395 CTCFLQ8NI51 663 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-201ENST00000262395 MYO1AQ9UBC5 1043 aa20.17■□□□□ 0.82
TRAF4-201ENST00000262395 BAZ2AQ9UIF9 1905 aaKnown RBP20.17■□□□□ 0.82
TRAF4-201ENST00000262395 NKRFO15226 690 aaKnown RBP eCLIP20.17■□□□□ 0.822e-7■■□□□ 11.4
TRAF4-201ENST00000262395 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
TRAF4-201ENST00000262395 FKBP15Q5T1M5 1219 aa20.17■□□□□ 0.82
TRAF4-201ENST00000262395 PAXIP1Q6ZW49 1069 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-201ENST00000262395 SMCR8Q8TEV9 937 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-201ENST00000262395 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
TRAF4-201ENST00000262395 FAM205AQ6ZU69 1335 aa20.17■□□□□ 0.82
TRAF4-201ENST00000262395 TIAM2Q8IVF5 1701 aa20.17■□□□□ 0.82
TRAF4-201ENST00000262395 CYP2D6P10635 497 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 C2orf54Q08AI8 447 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 JAKMIP2Q96AA8 810 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 RIOK1Q9BRS2 568 aaKnown RBP20.16■□□□□ 0.82
TRAF4-201ENST00000262395 JADE2Q9NQC1 790 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 JAG2Q9Y219 1238 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 PLEKHG2Q9H7P9 1386 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 PDE2AO00408 941 aaPredicted RBP20.16■□□□□ 0.82
TRAF4-201ENST00000262395 SCG2P13521 617 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 IRX3P78415 501 aaPredicted RBP20.16■□□□□ 0.82
TRAF4-201ENST00000262395 GOLGA6L1Q8N7Z2 621 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 IVLP07476 585 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 ERCC3P19447 782 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 RCAN1P53805 252 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 TRIM14Q14142 442 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 WDR93Q6P2C0 686 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 CTR9Q6PD62 1173 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 PSMB7Q99436 277 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 HPCAL4Q9UM19 191 aa20.16■□□□□ 0.82
TRAF4-201ENST00000262395 SLIT2O94813 1529 aa20.15■□□□□ 0.82
TRAF4-201ENST00000262395 TRIM21P19474 475 aaKnown RBP20.15■□□□□ 0.82
TRAF4-201ENST00000262395 GGCXP38435 758 aa20.15■□□□□ 0.82
TRAF4-201ENST00000262395 HAUS4Q9H6D7 363 aa20.15■□□□□ 0.82
TRAF4-201ENST00000262395 RBM28Q9NW13 759 aaKnown RBP20.15■□□□□ 0.82
TRAF4-201ENST00000262395 MATR3P43243 847 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRAF4-201ENST00000262395 ADSSL1Q8N142 457 aa20.15■□□□□ 0.82
TRAF4-201ENST00000262395 AFAP1L1Q8TED9 768 aa20.15■□□□□ 0.82
TRAF4-201ENST00000262395 ACBD3Q9H3P7 528 aa20.15■□□□□ 0.82
TRAF4-201ENST00000262395 LGALS16A8MUM7 142 aa20.14■□□□□ 0.82
TRAF4-201ENST00000262395 PSMD14O00487 310 aa20.14■□□□□ 0.82
TRAF4-201ENST00000262395 KRT26Q7Z3Y9 468 aa20.14■□□□□ 0.82
TRAF4-201ENST00000262395 ZNF384Q8TF68 577 aa20.14■□□□□ 0.82
TRAF4-201ENST00000262395 H7C1D1 291 aa20.14■□□□□ 0.81
TRAF4-201ENST00000262395 STIM1Q13586 685 aa20.14■□□□□ 0.81
TRAF4-201ENST00000262395 EZH2Q15910 746 aaKnown RBP20.14■□□□□ 0.81
TRAF4-201ENST00000262395 TMEM60Q9H2L4 133 aa20.14■□□□□ 0.81
TRAF4-201ENST00000262395 ANAPC4Q9UJX5 808 aa20.14■□□□□ 0.81
TRAF4-201ENST00000262395 EIF3CLB5ME19 914 aaKnown RBP20.13■□□□□ 0.81
TRAF4-201ENST00000262395 PPP2R5BQ15173 497 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 NAALADL2Q58DX5 795 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 EIF3CQ99613 913 aaKnown RBP20.13■□□□□ 0.81
TRAF4-201ENST00000262395 MTA3Q9BTC8 594 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 RMND1Q9NWS8 449 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 SMARCAL1Q9NZC9 954 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 PLEKP08567 350 aaPredicted RBP20.13■□□□□ 0.81
TRAF4-201ENST00000262395 IDEP14735 1019 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 TUBB4BP68371 445 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 LRRC15Q8TF66 581 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 HPS3Q969F9 1004 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 DNAJC7Q99615 494 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 MED4Q9NPJ6 270 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 MAGEC2Q9UBF1 373 aaPredicted RBP20.13■□□□□ 0.81
TRAF4-201ENST00000262395 BCL9LQ86UU0 1499 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 CCDC152Q4G0S7 254 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 ZNF507Q8TCN5 953 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 NHEJ1Q9H9Q4 299 aaPredicted RBP20.13■□□□□ 0.81
TRAF4-201ENST00000262395 DISC1Q9NRI5 854 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 CAPN11Q9UMQ6 739 aa20.13■□□□□ 0.81
TRAF4-201ENST00000262395 NUP98P52948 1817 aa20.12■□□□□ 0.81
TRAF4-201ENST00000262395 TTC19Q6DKK2 380 aaPredicted RBP20.12■□□□□ 0.81
TRAF4-201ENST00000262395 HDAC7Q8WUI4 952 aa20.12■□□□□ 0.81
TRAF4-201ENST00000262395 EHD4Q9H223 541 aa20.12■□□□□ 0.81
TRAF4-201ENST00000262395 SHANK3Q9BYB0 1731 aa20.12■□□□□ 0.81
TRAF4-201ENST00000262395 TBC1D8BQ0IIM8 1120 aa20.12■□□□□ 0.81
TRAF4-201ENST00000262395 STAG2Q8N3U4 1231 aa20.12■□□□□ 0.81
TRAF4-201ENST00000262395 CSGALNACT2Q8N6G5 542 aa20.12■□□□□ 0.81
TRAF4-201ENST00000262395 SMARCC1Q92922 1105 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms