RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 MMEL1Q495T6 779 aa15.7■□□□□ 0.1
CUX2-201ENST00000261726 GPBP1Q86WP2 473 aa15.7■□□□□ 0.1
CUX2-201ENST00000261726 XAB2Q9HCS7 855 aaKnown RBP15.7■□□□□ 0.1
CUX2-201ENST00000261726 IMPACTQ9P2X3 320 aa15.7■□□□□ 0.1
CUX2-201ENST00000261726 LIG4P49917 911 aa15.7■□□□□ 0.1
CUX2-201ENST00000261726 KIF11P52732 1056 aa15.7■□□□□ 0.1
CUX2-201ENST00000261726 TCIRG1Q13488 830 aa15.7■□□□□ 0.1
CUX2-201ENST00000261726 USH1CQ9Y6N9 552 aa15.7■□□□□ 0.1
CUX2-201ENST00000261726 FRMPD2Q68DX3 1309 aaPredicted RBP15.7■□□□□ 0.1
CUX2-201ENST00000261726 PPFIA2O75334 1257 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 KRT40Q6A162 431 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 CDC37L1Q7L3B6 337 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 HAUS8Q9BT25 410 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 KLHL14Q9P2G3 628 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 CSPG5O95196 566 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 SERPINB6P35237 376 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 ATP1A2P50993 1020 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 MAP3K21Q5TCX8 1036 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 KDRP35968 1356 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 ARHGAP6O43182 974 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 OTUD7AQ8TE49 926 aaPredicted RBP15.69■□□□□ 0.1
CUX2-201ENST00000261726 PSPC1Q8WXF1 523 aaKnown RBP15.69■□□□□ 0.1
CUX2-201ENST00000261726 CCDC68Q9H2F9 335 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 SERTAD1Q9UHV2 236 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 CMTR1Q8N1G2 835 aaKnown RBP15.69■□□□□ 0.1
CUX2-201ENST00000261726 FAM193BQ96PV7 902 aaPredicted RBP15.69■□□□□ 0.1
CUX2-201ENST00000261726 UHRF1BP1LA0JNW5 1464 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 ECE1P42892 770 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 GNGT1P63211 74 aa15.69■□□□□ 0.1
CUX2-201ENST00000261726 GADD45BO75293 160 aaPredicted RBP15.68■□□□□ 0.1
CUX2-201ENST00000261726 HADHQ16836 314 aaKnown RBP15.68■□□□□ 0.1
CUX2-201ENST00000261726 G2E3Q7L622 706 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 PLBD2Q8NHP8 589 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 MICAL1Q8TDZ2 1067 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.68■□□□□ 0.1
CUX2-201ENST00000261726 RIPOR2Q9Y4F9 1068 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 PALM3A6NDB9 673 aaPredicted RBP15.68■□□□□ 0.1
CUX2-201ENST00000261726 TNNC2P02585 160 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 STAT1P42224 750 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 TEX14Q8IWB6 1497 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 THAP12O43422 761 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 XRCC5P13010 732 aaKnown RBP15.68■□□□□ 0.1
CUX2-201ENST00000261726 TFAP4Q01664 338 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 SPATA5Q8NB90 893 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 SDCCAG3Q96C92 435 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 CAPN7Q9Y6W3 813 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 ZNF532Q9HCE3 1301 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 FLT4P35916 1363 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 SMCO2A6NFE2 343 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 NR1I2O75469 434 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 CDR2Q01850 454 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 REXO1Q8N1G1 1221 aaKnown RBP15.68■□□□□ 0.1
CUX2-201ENST00000261726 MAD1L1Q9Y6D9 718 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 K7ENM7 598 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 TECP42680 631 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 MCUQ8NE86 351 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 CFAP61Q8NHU2 1237 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 PARD3BQ8TEW8 1205 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 GRK7Q8WTQ7 553 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 TPX2Q9ULW0 747 aaKnown RBP15.68■□□□□ 0.1
CUX2-201ENST00000261726 IRX4P78413 519 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 NUCKS1Q9H1E3 243 aaKnown RBP15.68■□□□□ 0.1
CUX2-201ENST00000261726 SAR1BQ9Y6B6 198 aa15.68■□□□□ 0.1
CUX2-201ENST00000261726 DLATP10515 647 aaKnown RBP15.67■□□□□ 0.1
CUX2-201ENST00000261726 PHLDB3Q6NSJ2 640 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 HOOK2Q96ED9 719 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 SPC25Q9HBM1 224 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 JAK2O60674 1132 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 ARHGAP4P98171 946 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 LRGUKQ96M69 825 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 EYA1Q99502 592 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 PPFIA4O75335 1185 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 PHEXP78562 749 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 HINFPQ9BQA5 517 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 METTL22Q9BUU2 404 aaPredicted RBP15.67■□□□□ 0.1
CUX2-201ENST00000261726 PARP10Q53GL7 1025 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 ZNF277Q9NRM2 450 aaPredicted RBP15.67■□□□□ 0.1
CUX2-201ENST00000261726 PRAG1Q86YV5 1406 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 GNA14O95837 355 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 PDE6CP51160 858 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 TTBK2Q6IQ55 1244 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 CCDC84Q86UT8 332 aaPredicted RBP15.67■□□□□ 0.1
CUX2-201ENST00000261726 ZBTB40Q9NUA8 1239 aa15.67■□□□□ 0.1
CUX2-201ENST00000261726 CFAP74Q9C0B2 1584 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 IGBP1P78318 339 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 LZTS2Q9BRK4 669 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 MAGED2Q9UNF1 606 aaPredicted RBP15.66■□□□□ 0.1
CUX2-201ENST00000261726 KCNJ18B7U540 433 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 S100BP04271 92 aaPredicted RBP15.66■□□□□ 0.1
CUX2-201ENST00000261726 SLC12A1Q13621 1099 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 KCNJ12Q14500 433 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 HAUS1Q96CS2 278 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 WHAMMP3Q1A5X7 153 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 SMAP1Q8IYB5 467 aaPredicted RBP15.66■□□□□ 0.1
CUX2-201ENST00000261726 PDCD7Q8N8D1 485 aaKnown RBP15.66■□□□□ 0.1
CUX2-201ENST00000261726 KDM2BQ8NHM5 1336 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 SLC4A1P02730 911 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms