RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 ZNF532Q9HCE3 1301 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 TRAF5O00463 557 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 CCNT1O60563 726 aaKnown RBP4.77□□□□□ -1.65
VPS13C-202ENST00000261517 ZSCAN20P17040 1043 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-202ENST00000261517 E2F5Q15329 346 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 TCHPQ9BT92 498 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 STIM2Q9P246 746 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 FAM8A1Q9UBU6 413 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 TCP1P17987 556 aaKnown RBP4.77□□□□□ -1.65
VPS13C-202ENST00000261517 TNFAIP3P21580 790 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 DNM1Q05193 864 aaKnown RBP4.77□□□□□ -1.65
VPS13C-202ENST00000261517 SLFN12LQ6IEE8 588 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 ZNF654Q8IZM8 581 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 DHX58Q96C10 678 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 BEGAINQ9BUH8 593 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 TEKT3Q9BXF9 490 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 SEL1LQ9UBV2 794 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS13C-202ENST00000261517 RICTORQ6R327 1708 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 SFMBT2Q5VUG0 894 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 USP44Q9H0E7 712 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 TRPV6Q9H1D0 765 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 SNRKQ9NRH2 765 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 TMEM131LA2VDJ0 1609 aa4.77□□□□□ -1.65
VPS13C-202ENST00000261517 ZBTB24O43167 697 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MUM1L1Q5H9M0 696 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 ARHGAP27Q6ZUM4 889 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 UNC5CLQ8IV45 518 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 CCDC170Q8IYT3 715 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 AOPEPQ8N6M6 819 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MAP3K14Q99558 947 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MED4Q9NPJ6 270 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 LRWD1Q9UFC0 647 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 HCLS1P14317 486 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 PDE6AP16499 860 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MCM7P33993 719 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 LRRC63Q05C16 580 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 DGKHQ86XP1 1220 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 GIMAP7Q8NHV1 300 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MAP4K1Q92918 833 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 TBC1D31Q96DN5 1066 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 AMNQ9BXJ7 453 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 KDM6AO15550 1401 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 JCADQ9P266 1359 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 PALM3A6NDB9 673 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 XRCC5P13010 732 aaKnown RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 ELOA2Q8IYF1 753 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 IGSF22Q8N9C0 903 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 PPP1R2P1Q96PQ5 205 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MAF1Q9H063 256 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 PUF60Q9UHX1 559 aaKnown RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 CCPG1Q9ULG6 757 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MRVI1Q9Y6F6 885 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 E7EWF7 191 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 GAS7O60861 476 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 SLC39A6Q13433 755 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 TAF12Q16514 161 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 SND1Q7KZF4 910 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 CSGALNACT2Q8N6G5 542 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 FAM76AQ8TAV0 307 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 SUCLG2Q96I99 432 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 BPIFA3Q9BQP9 254 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 VEZTQ9HBM0 779 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 VAT1LQ9HCJ6 419 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 RIMS1Q86UR5 1692 aaKnown RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 SPDYE4A6NLX3 237 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 KPNA2P52292 529 aaKnown RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MFSD14BQ5SR56 506 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MORC4Q8TE76 937 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 VCXQ9H320 206 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 HAUS4Q9H6D7 363 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MED7O43513 233 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 PTPREP23469 700 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 GABPB1Q06547 395 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 NBPF11Q86T75 865 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MMRN2Q9H8L6 949 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 SPINK5Q9NQ38 1064 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 OGFRQ9NZT2 677 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 CPDO75976 1380 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 EVI5O60447 810 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 STAT1P42224 750 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MAP7D1Q3KQU3 841 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 GSTA5Q7RTV2 222 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 ZNF496Q96IT1 587 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 COMMD10Q9Y6G5 202 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 USP42Q9H9J4 1324 aaKnown RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 EBAG9O00559 213 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 AP3M2P53677 418 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 RAB3IPQ96QF0 476 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 KCND2Q9NZV8 630 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 PPFIA4O75335 1185 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 JAK3P52333 1124 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 DIS3L2Q8IYB7 885 aaKnown RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 MYOCDQ8IZQ8 938 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 DCPSQ96C86 337 aaKnown RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 DNAJC5Q9H3Z4 198 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 PSTPIP2Q9H939 334 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 FAM169AQ9Y6X4 670 aa4.76□□□□□ -1.65
VPS13C-202ENST00000261517 FMNL1O95466 1100 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-202ENST00000261517 HADHQ16836 314 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms