RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RAB11FIP4Q86YS3 637 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 GPCPD1Q9NPB8 672 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 FBXO28Q9NVF7 368 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 RNF186Q9NXI6 227 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 HSP90AA1P07900 732 aaKnown RBP24.08■■□□□ 1.45
RTCA-201ENST00000260563 GOLGA8HP0CJ92 632 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 PDIA3P30101 505 aaKnown RBP24.08■■□□□ 1.45
RTCA-201ENST00000260563 RCAN1P53805 252 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 HERVK_113P62684 666 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 STK3Q13188 491 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 CRHR2Q13324 411 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 JMYQ8N9B5 988 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 CHURC1Q8WUH1 139 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 SLKQ9H2G2 1235 aaPredicted RBP24.08■■□□□ 1.45
RTCA-201ENST00000260563 SAGE1Q9NXZ1 904 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 MAD2L2Q9UI95 211 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 PPP1R9AQ9ULJ8 1098 aa24.08■■□□□ 1.45
RTCA-201ENST00000260563 SPDYE16A6NNV3 312 aaPredicted RBP24.07■■□□□ 1.44
RTCA-201ENST00000260563 PLA2G6O60733 806 aa24.07■■□□□ 1.44
RTCA-201ENST00000260563 PFKFB2O60825 505 aa24.07■■□□□ 1.44
RTCA-201ENST00000260563 TRPA1O75762 1119 aa24.07■■□□□ 1.44
RTCA-201ENST00000260563 DSG3P32926 999 aa24.07■■□□□ 1.44
RTCA-201ENST00000260563 KIF5BP33176 963 aa24.07■■□□□ 1.44
RTCA-201ENST00000260563 CCDC144CPQ8IYA2 1237 aa24.07■■□□□ 1.44
RTCA-201ENST00000260563 GTF3C2Q8WUA4 911 aaPredicted RBP24.07■■□□□ 1.44
RTCA-201ENST00000260563 P2RX7Q99572 595 aaKnown RBP24.07■■□□□ 1.44
RTCA-201ENST00000260563 HOXC10Q9NYD6 342 aa24.07■■□□□ 1.44
RTCA-201ENST00000260563 GOLGA8AA7E2F4 631 aa24.06■■□□□ 1.44
RTCA-201ENST00000260563 TTBK2Q6IQ55 1244 aa24.06■■□□□ 1.44
RTCA-201ENST00000260563 NECAB1Q8N987 351 aa24.06■■□□□ 1.44
RTCA-201ENST00000260563 PRPF38AQ8NAV1 312 aaKnown RBP24.06■■□□□ 1.44
RTCA-201ENST00000260563 SPRYD3Q8NCJ5 442 aa24.06■■□□□ 1.44
RTCA-201ENST00000260563 KIFC2Q96AC6 838 aa24.06■■□□□ 1.44
RTCA-201ENST00000260563 CFHR5Q9BXR6 569 aa24.06■■□□□ 1.44
RTCA-201ENST00000260563 NID2Q14112 1375 aa24.06■■□□□ 1.44
RTCA-201ENST00000260563 ADGRA2Q96PE1 1338 aa24.06■■□□□ 1.44
RTCA-201ENST00000260563 PALM3A6NDB9 673 aaPredicted RBP24.05■■□□□ 1.44
RTCA-201ENST00000260563 METAP2P50579 478 aaKnown RBP eCLIP24.05■■□□□ 1.44
RTCA-201ENST00000260563 LBX2Q6XYB7 198 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 CCDC83Q8IWF9 413 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 STAG2Q8N3U4 1231 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 GTF3C6Q969F1 213 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 ATG4CQ96DT6 458 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 WBP1LQ9NX94 342 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 TLR2O60603 784 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 SLC16A2P36021 539 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 GCLCP48506 637 aaPredicted RBP24.05■■□□□ 1.44
RTCA-201ENST00000260563 ST3GAL1Q11201 340 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 SCRN1Q12765 414 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 RTN1Q16799 776 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 SYDE2Q5VT97 1194 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 BTNL9Q6UXG8 535 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 FANCBQ8NB91 859 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 FOXD4L1Q9NU39 408 aa24.05■■□□□ 1.44
RTCA-201ENST00000260563 RBM28Q9NW13 759 aaKnown RBP24.05■■□□□ 1.44
RTCA-201ENST00000260563 MGAMO43451 1857 aa24.04■■□□□ 1.44
RTCA-201ENST00000260563 BAZ2BQ9UIF8 2168 aaKnown RBP24.04■■□□□ 1.44
RTCA-201ENST00000260563 KLRF2D3W0D1 207 aa24.04■■□□□ 1.44
RTCA-201ENST00000260563 INTS4Q96HW7 963 aaKnown RBP24.04■■□□□ 1.44
RTCA-201ENST00000260563 PRR12Q9ULL5 1215 aa24.04■■□□□ 1.44
RTCA-201ENST00000260563 HPS5Q9UPZ3 1129 aa24.04■■□□□ 1.44
RTCA-201ENST00000260563 TBC1D8O95759 1140 aa24.03■■□□□ 1.44
RTCA-201ENST00000260563 GNAQP50148 359 aa24.03■■□□□ 1.44
RTCA-201ENST00000260563 CCT2P78371 535 aaKnown RBP24.03■■□□□ 1.44
RTCA-201ENST00000260563 MB21D1Q8N884 522 aa24.03■■□□□ 1.44
RTCA-201ENST00000260563 PAGR1Q9BTK6 254 aa24.03■■□□□ 1.44
RTCA-201ENST00000260563 CTDP1Q9Y5B0 961 aaPredicted RBP24.03■■□□□ 1.44
RTCA-201ENST00000260563 VWA5AO00534 786 aa24.02■■□□□ 1.44
RTCA-201ENST00000260563 DHX16O60231 1041 aaKnown RBP24.02■■□□□ 1.44
RTCA-201ENST00000260563 PPP2R5BQ15173 497 aa24.02■■□□□ 1.44
RTCA-201ENST00000260563 UBA5Q9GZZ9 404 aa24.02■■□□□ 1.44
RTCA-201ENST00000260563 CPVLQ9H3G5 476 aa24.02■■□□□ 1.44
RTCA-201ENST00000260563 ADAMTS5Q9UNA0 930 aa24.02■■□□□ 1.44
RTCA-201ENST00000260563 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.02■■□□□ 1.44
RTCA-201ENST00000260563 FDX1P10109 184 aa24.01■■□□□ 1.43
RTCA-201ENST00000260563 ANKRD13CQ8N6S4 541 aa24.01■■□□□ 1.43
RTCA-201ENST00000260563 LZTS2Q9BRK4 669 aa24.01■■□□□ 1.43
RTCA-201ENST00000260563 CPA4Q9UI42 421 aa24.01■■□□□ 1.43
RTCA-201ENST00000260563 CCDC196A0A1B0GTZ2 297 aa24■■□□□ 1.43
RTCA-201ENST00000260563 ZBED4O75132 1171 aa24■■□□□ 1.43
RTCA-201ENST00000260563 PLEKHA8P1O95397 391 aa24■■□□□ 1.43
RTCA-201ENST00000260563 FAM110CQ1W6H9 321 aa24■■□□□ 1.43
RTCA-201ENST00000260563 TMTC3Q6ZXV5 915 aa24■■□□□ 1.43
RTCA-201ENST00000260563 NCOA5Q9HCD5 579 aaKnown RBP24■■□□□ 1.43
RTCA-201ENST00000260563 RABGAP1Q9Y3P9 1069 aa24■■□□□ 1.43
RTCA-201ENST00000260563 RBBP6Q7Z6E9 1792 aaKnown RBP24■■□□□ 1.43
RTCA-201ENST00000260563 BCRP11274 1271 aa24■■□□□ 1.43
RTCA-201ENST00000260563 C17orf99Q6UX52 265 aa24■■□□□ 1.43
RTCA-201ENST00000260563 ADGRF4Q8IZF3 695 aa24■■□□□ 1.43
RTCA-201ENST00000260563 RANBP17Q9H2T7 1088 aaKnown RBP24■■□□□ 1.43
RTCA-201ENST00000260563 R3HDMLQ9H3Y0 253 aa24■■□□□ 1.43
RTCA-201ENST00000260563 SLC38A10Q9HBR0 1119 aa24■■□□□ 1.43
RTCA-201ENST00000260563 TXNRD2Q9NNW7 524 aa24■■□□□ 1.43
RTCA-201ENST00000260563 CDC27P30260 824 aa23.99■■□□□ 1.43
RTCA-201ENST00000260563 ERVK-9P63128 1117 aa23.99■■□□□ 1.43
RTCA-201ENST00000260563 ERVK-24P63145 666 aa23.99■■□□□ 1.43
RTCA-201ENST00000260563 SPZ1Q9BXG8 430 aa23.99■■□□□ 1.43
RTCA-201ENST00000260563 BTBD7Q9P203 1132 aa23.99■■□□□ 1.43
RTCA-201ENST00000260563 RBPJLQ9UBG7 517 aa23.99■■□□□ 1.43
RTCA-201ENST00000260563 MORF4L1Q9UBU8 362 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms