RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TXLNAP40222 546 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 ECE1P42892 770 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 CRKP46108 304 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 CHMP4BP1P59074 171 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 MRPS25P82663 173 aaKnown RBP10.3□□□□□ -0.76
CKAP2-201ENST00000258607 ZNF512BQ96KM6 892 aaPredicted RBP10.3□□□□□ -0.76
CKAP2-201ENST00000258607 PRMT6Q96LA8 375 aaPredicted RBP10.3□□□□□ -0.76
CKAP2-201ENST00000258607 TRIM47Q96LD4 638 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 CRACR2AQ9BSW2 395 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 TJP1Q07157 1748 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 HLA-DOAP06340 250 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 SRGNP10124 158 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 NLGN1Q8N2Q7 840 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 CCDC112Q8NEF3 446 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 KIAA1524Q8TCG1 905 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 HOOK1Q9UJC3 728 aaKnown RBP10.29□□□□□ -0.76
CKAP2-201ENST00000258607 GLI3P10071 1580 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 FCER1AP12319 257 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 U2AF2P26368 475 aaKnown RBP eCLIP10.29□□□□□ -0.765e-6■□□□□ 9.7
CKAP2-201ENST00000258607 SLC10A5Q5PT55 438 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 FBXO28Q9NVF7 368 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 AKAP11Q9UKA4 1901 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 RFX7Q2KHR2 1363 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 PEX10O60683 326 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 PTPREP23469 700 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 RC3H1Q5TC82 1133 aaKnown RBP10.29□□□□□ -0.76
CKAP2-201ENST00000258607 RESP18Q5W5W9 173 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 IL17RAQ96F46 866 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 CEP131Q9UPN4 1083 aa10.29□□□□□ -0.76
CKAP2-201ENST00000258607 BBOX1O75936 387 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 DPYDQ12882 1025 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 CERKLQ49MI3 558 aaPredicted RBP10.28□□□□□ -0.76
CKAP2-201ENST00000258607 CEP135Q66GS9 1140 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 ARMCX5Q6P1M9 558 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 TBC1D5Q92609 795 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 PAGE5Q96GU1 130 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 TMEM39BQ9GZU3 492 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 MAD2L2Q9UI95 211 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 NPHP3-ACAD11A0A0J9YXS1 232 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 NRDCO43847 1150 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 EEF2P13639 858 aaKnown RBP10.28□□□□□ -0.76
CKAP2-201ENST00000258607 IL17AQ16552 155 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 REXO1Q8N1G1 1221 aaKnown RBP10.28□□□□□ -0.76
CKAP2-201ENST00000258607 LRRN4CLQ8ND94 238 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 GLIS3Q8NEA6 775 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 GNG11P61952 73 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 MCM6Q14566 821 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 PRR16Q569H4 304 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 DNAAF5Q86Y56 855 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 PHF20Q9BVI0 1012 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 BCAS3Q9H6U6 928 aa10.28□□□□□ -0.76
CKAP2-201ENST00000258607 COL16A1Q07092 1604 aaPredicted RBP10.27□□□□□ -0.76
CKAP2-201ENST00000258607 SOWAHDA6NJG2 315 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 NKRFO15226 690 aaKnown RBP eCLIP10.27□□□□□ -0.77
CKAP2-201ENST00000258607 PRPF3O43395 683 aaKnown RBP10.27□□□□□ -0.77
CKAP2-201ENST00000258607 PLCG1P19174 1290 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 PDE4DQ08499 809 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 OGFOD1Q8N543 542 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 CYP2W1Q8TAV3 490 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 AKT1S1Q96B36 256 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 NUDT12Q9BQG2 462 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 GLIS2Q9BZE0 524 aaPredicted RBP10.27□□□□□ -0.77
CKAP2-201ENST00000258607 FOXP1Q9H334 677 aaPredicted RBP10.27□□□□□ -0.77
CKAP2-201ENST00000258607 TCP11L1Q9NUJ3 509 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 PCDHA1Q9Y5I3 950 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 A0A1W2PQ27 194 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 A0A1W2PQ64 194 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 A0A1W2PQD8 194 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 SMTNL1A8MU46 457 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 KLK7P49862 253 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 NAP1L1P55209 391 aaKnown RBP10.27□□□□□ -0.77
CKAP2-201ENST00000258607 EVCP57679 992 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 RHBDL3P58872 404 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 ICA1Q05084 483 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 PFKFB3Q16875 520 aaPredicted RBP10.27□□□□□ -0.77
CKAP2-201ENST00000258607 PPFIBP1Q86W92 1011 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 ANKRD13CQ8N6S4 541 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 ACER1Q8TDN7 264 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 PUF60Q9UHX1 559 aaKnown RBP10.27□□□□□ -0.77
CKAP2-201ENST00000258607 MKI67P46013 3256 aaKnown RBP10.27□□□□□ -0.77
CKAP2-201ENST00000258607 SYNRGQ9UMZ2 1314 aa10.27□□□□□ -0.77
CKAP2-201ENST00000258607 SLC37A4O43826 429 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 NEMFO60524 1076 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 PLA2G4DQ86XP0 818 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 CCDC155Q8N6L0 562 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 SNX29Q8TEQ0 813 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 GDAP1L1Q96MZ0 367 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 RBM28Q9NW13 759 aaKnown RBP10.26□□□□□ -0.77
CKAP2-201ENST00000258607 STK32BQ9NY57 414 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 EGFRP00533 1210 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 UBXN1Q04323 297 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 WDR78Q5VTH9 848 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 NCAPH2Q6IBW4 605 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 SAMD7Q7Z3H4 446 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 ADGRF4Q8IZF3 695 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 IQUBQ8NA54 791 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 RDH13Q8NBN7 331 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 NELFBQ8WX92 580 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 SRRTQ9BXP5 876 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 332.1 ms