RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TMEM63CQ9P1W3 806 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 U3KPZ7 1027 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 PSDA5PKW4 1024 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 GNAT3A8MTJ3 354 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 ADCY3O60266 1144 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 LMNAP02545 664 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 CCT4P50991 539 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 ALDH1L2Q3SY69 923 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 TLK2Q86UE8 772 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 MCUR1Q96AQ8 359 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 GDAP1L1Q96MZ0 367 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 ANKRD27Q96NW4 1050 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 DMRT2Q9Y5R5 561 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 HSPA8P11142 646 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 POU5F1Q01860 360 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 POSTNQ15063 836 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 CCPG1Q9ULG6 757 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 ANGPTL3Q9Y5C1 460 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 BICDL2A1A5D9 508 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 E9PMD0 336 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 MYO1FO00160 1098 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 ESRRBO95718 433 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 UBTFL1P0CB47 393 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 HSPA9P38646 679 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 HDLBPQ00341 1268 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 DDHD1Q8NEL9 900 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 FHDC1Q9C0D6 1143 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 CCDC87Q9NVE4 849 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 PCP4L1A6NKN8 68 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 SCNN1BP51168 640 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 PHLPP2Q6ZVD8 1323 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 KLHL29Q96CT2 875 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 SLC40A1Q9NP59 571 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 PDP2Q9P2J9 529 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 DSEQ9UL01 958 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 CORO1CQ9ULV4 474 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 EMILIN1Q9Y6C2 1016 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 NBPF26B4DH59 902 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 N4BP3O15049 544 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 BCAR3O75815 825 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 EEF2P13639 858 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 LARP1BQ659C4 914 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 RIC3Q7Z5B4 369 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 SAPCD2Q86UD0 394 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 NUDCD3Q8IVD9 361 aa7.42□□□□□ -1.22
PDGFRA-201ENST00000257290 KDM5CP41229 1560 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 SPATA31E1Q6ZUB1 1445 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 BAG2O95816 211 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 LMNB2Q03252 620 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 FLIIQ13045 1269 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 STX3Q13277 289 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 FAM133AQ8N9E0 248 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 KDM5AP29375 1690 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 TRIM64A6NGJ6 449 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 TRIM64BA6NI03 449 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 TMOD1P28289 359 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 RAP1GDS1P52306 607 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 ATF7IPQ6VMQ6 1270 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 ATP11BQ9Y2G3 1177 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 TBX22Q9Y458 520 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 ATP2A2P16615 1042 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 LONP1P36776 959 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 NEK10Q6ZWH5 1172 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 VPS36Q86VN1 386 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 CROTQ9UKG9 612 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 LRRIQ1Q96JM4 1722 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 TADA3O75528 432 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 ZNF24P17028 368 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 CCND1P24385 295 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 MRPS25P82663 173 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 CASP8Q14790 479 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 NAA30Q147X3 362 aaPredicted RBP7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 STK38Q15208 465 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 CCDC93Q567U6 631 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 ZNF569Q5MCW4 686 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 TRIM63Q969Q1 353 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 BHMT2Q9H2M3 363 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 EHMT1Q9H9B1 1298 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 INSRP06213 1382 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 ABCC3O15438 1527 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 IFIT2P09913 472 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 KRT76Q01546 638 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 DDR1Q08345 913 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 SPA17Q15506 151 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 CCDC125Q86Z20 511 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 ZSCAN31Q96LW9 406 aaPredicted RBP7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 SUN2Q9UH99 717 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 RWDD3Q9Y3V2 267 aa7.41□□□□□ -1.22
PDGFRA-201ENST00000257290 ARHGEF9O43307 516 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 SERPINB4P48594 390 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 ATP1A2P50993 1020 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 LMBRD2Q68DH5 695 aaPredicted RBP7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 SND1Q7KZF4 910 aaKnown RBP eCLIP7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 ZC3H18Q86VM9 953 aaKnown RBP7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 DHRS1Q96LJ7 313 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 NAPGQ99747 312 aaPredicted RBP7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 DDX21Q9NR30 783 aaKnown RBP eCLIP7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 STOML1Q9UBI4 398 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 ME1P48163 572 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms