RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 PPP4R3BQ5MIZ7 849 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 SLFN13Q68D06 897 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 KIAA1211Q6ZU35 1233 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 ATG4CQ96DT6 458 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 TMEM47Q9BQJ4 181 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 KRT23Q9C075 422 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 LSG1Q9H089 658 aaKnown RBP10.05□□□□□ -0.8
TMEM258-201ENST00000257262 PORCNQ9H237 461 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 ZSWIM5Q9P217 1185 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 ADAMTS5Q9UNA0 930 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 RBM8AQ9Y5S9 174 aaKnown RBP10.05□□□□□ -0.8
TMEM258-201ENST00000257262 CDC45O75419 566 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 MCCP23508 829 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 MAPK4P31152 587 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 FLT3LGP49771 235 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 CCNA1P78396 465 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 RCSD1Q6JBY9 416 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 CCAR1Q8IX12 1150 aaKnown RBP10.04□□□□□ -0.8
TMEM258-201ENST00000257262 PRPF38AQ8NAV1 312 aaKnown RBP10.04□□□□□ -0.8
TMEM258-201ENST00000257262 RAET1EQ8TD07 263 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 SH3TC2Q8TF17 1288 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 TTC14Q96N46 770 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 CNNM2Q9H8M5 875 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 ANO2Q9NQ90 1003 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 GJD2Q9UKL4 321 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 PPP1R9AQ9ULJ8 1098 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 MTMR7Q9Y216 660 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 TAF6LQ9Y6J9 622 aa10.04□□□□□ -0.8
TMEM258-201ENST00000257262 TMEM232C9JQI7 657 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 E7EWF7 191 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 VWA5AO00534 786 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 TOP1P11387 765 aaKnown RBP10.03□□□□□ -0.8
TMEM258-201ENST00000257262 SLC1A4P43007 532 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 NT5C2P49902 561 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 PLS1Q14651 629 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 TMEM132BQ14DG7 1078 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 NECTIN1Q15223 517 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 SLC9C1Q4G0N8 1177 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 WDR78Q5VTH9 848 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 CASC1Q6TDU7 716 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 KCTD1Q719H9 257 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 CYB5R4Q7L1T6 521 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 RASGRP2Q7LDG7 609 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 GPR142Q7Z601 462 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 PLEKHH3Q7Z736 793 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 NBPF11Q86T75 865 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 IQCA1Q86XH1 822 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 DGKHQ86XP1 1220 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 MB21D1Q8N884 522 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 KIFC2Q96AC6 838 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 GMCL1Q96IK5 515 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 ZSCAN10Q96SZ4 725 aaPredicted RBP10.03□□□□□ -0.8
TMEM258-201ENST00000257262 SLF1Q9BQI6 1058 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 TMEM121BQ9BXQ6 578 aaPredicted RBP10.03□□□□□ -0.8
TMEM258-201ENST00000257262 MOV10L1Q9BXT6 1211 aaKnown RBP10.03□□□□□ -0.8
TMEM258-201ENST00000257262 SPATC1LQ9H0A9 340 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 FEM1BQ9UK73 627 aa10.03□□□□□ -0.8
TMEM258-201ENST00000257262 DOCK3Q8IZD9 2030 aa10.02□□□□□ -0.8
TMEM258-201ENST00000257262 POTEMA6NI47 508 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 ADCY3O60266 1144 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 ELNP15502 786 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 CYP2B6P20813 491 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 GRK4P32298 578 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 TRDNQ13061 729 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 IRF5Q13568 498 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 CCDC178Q5BJE1 867 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 STOX1Q6ZVD7 989 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 REPS2Q8NFH8 660 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 PXYLP1Q8TE99 480 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 ARMC5Q96C12 935 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 NUDT12Q9BQG2 462 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
TMEM258-201ENST00000257262 ZNF214Q9UL59 606 aaPredicted RBP10.02□□□□□ -0.81
TMEM258-201ENST00000257262 ISY1Q9ULR0 285 aaKnown RBP10.02□□□□□ -0.81
TMEM258-201ENST00000257262 TNKSO95271 1327 aa10.02□□□□□ -0.81
TMEM258-201ENST00000257262 SLC27A2O14975 620 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 ZBED4O75132 1171 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 MYCP01106 439 aaPredicted RBP10.01□□□□□ -0.81
TMEM258-201ENST00000257262 PRKCSHP14314 528 aaPredicted RBP10.01□□□□□ -0.81
TMEM258-201ENST00000257262 ERCC3P19447 782 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 PTPREP23469 700 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 STAT3P40763 770 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 STAT2P52630 851 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 SOX10P56693 466 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 IKQ13123 557 aaPredicted RBP10.01□□□□□ -0.81
TMEM258-201ENST00000257262 MORN1Q5T089 497 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 TTBK2Q6IQ55 1244 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 CHST3Q7LGC8 479 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 NCAPG2Q86XI2 1143 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 ENAHQ8N8S7 591 aaPredicted RBP10.01□□□□□ -0.81
TMEM258-201ENST00000257262 SHCBP1Q8NEM2 672 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 NCOA7Q8NI08 942 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 CHURC1Q8WUH1 139 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 DCAF4Q8WV16 495 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 ANKS1AQ92625 1134 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 USP6NLQ92738 828 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 ZNF333Q96JL9 665 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 MROH8Q9H579 483 aa10.01□□□□□ -0.81
TMEM258-201ENST00000257262 KAT14Q9H8E8 782 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms