RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 XDHP47989 1333 aa13.26□□□□□ -0.29
CCNA1-201ENST00000255465 RBM47A0AV96 593 aaKnown RBP13.25□□□□□ -0.29
CCNA1-201ENST00000255465 SPDYE3A6NKU9 549 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 C6orf229H3BNL8 230 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 PPIP5K2O43314 1243 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 SYF2O95926 243 aaKnown RBP13.25□□□□□ -0.29
CCNA1-201ENST00000255465 PYGLP06737 847 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 PDCP20941 246 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 DYNC1I2Q13409 638 aaKnown RBP13.25□□□□□ -0.29
CCNA1-201ENST00000255465 SNX1Q13596 522 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
CCNA1-201ENST00000255465 MYSM1Q5VVJ2 828 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 LDHAL6AQ6ZMR3 332 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 EXOC8Q8IYI6 725 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 LARGE2Q8N3Y3 721 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 ZNF784Q8NCA9 323 aaPredicted RBP13.25□□□□□ -0.29
CCNA1-201ENST00000255465 TBC1D16Q8TBP0 767 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 SH2B1Q9NRF2 756 aaPredicted RBP13.25□□□□□ -0.29
CCNA1-201ENST00000255465 LIMCH1Q9UPQ0 1083 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 GOLGA6CA6NDK9 693 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 GOLGA6BA6NDN3 693 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 MGRN1O60291 552 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 GNAI2P04899 355 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 GOLGA6DP0CG33 693 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 FOXD4L6Q3SYB3 417 aaPredicted RBP13.25□□□□□ -0.29
CCNA1-201ENST00000255465 FOXD4L3Q6VB84 417 aaPredicted RBP13.25□□□□□ -0.29
CCNA1-201ENST00000255465 TTC6Q86TZ1 520 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 GALNT15Q8N3T1 639 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 LZICQ8WZA0 190 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 KIFC2Q96AC6 838 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 CCDC114Q96M63 670 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 GOLGA6AQ9NYA3 693 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
CCNA1-201ENST00000255465 GOLGA8KD6RF30 607 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 UFL1O94874 794 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 ATP2B4P23634 1241 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 RFX5P48382 616 aaPredicted RBP13.24□□□□□ -0.29
CCNA1-201ENST00000255465 CHRNDQ07001 517 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 CEP57Q86XR8 500 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 CKAP2LQ8IYA6 745 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 KLHDC4Q8TBB5 520 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 HDAC7Q8WUI4 952 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 JDP2Q8WYK2 163 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 JAKMIP1Q96N16 626 aaKnown RBP13.24□□□□□ -0.29
CCNA1-201ENST00000255465 GPR101Q96P66 508 aaPredicted RBP13.24□□□□□ -0.29
CCNA1-201ENST00000255465 SH3GL2Q99962 352 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 PUS3Q9BZE2 481 aaKnown RBP13.24□□□□□ -0.29
CCNA1-201ENST00000255465 KAT14Q9H8E8 782 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 SLC39A2Q9NP94 309 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 CNNM1Q9NRU3 951 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 HOOK1Q9UJC3 728 aaKnown RBP13.24□□□□□ -0.29
CCNA1-201ENST00000255465 CDC23Q9UJX2 597 aa13.24□□□□□ -0.29
CCNA1-201ENST00000255465 VWA3AA6NCI4 1184 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 WTIPA6NIX2 430 aaPredicted RBP13.23□□□□□ -0.29
CCNA1-201ENST00000255465 MYL1P05976 194 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
CCNA1-201ENST00000255465 DHX40Q8IX18 779 aaKnown RBP13.23□□□□□ -0.29
CCNA1-201ENST00000255465 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 IGSF22Q8N9C0 903 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 RBM41Q96IZ5 413 aaKnown RBP13.23□□□□□ -0.29
CCNA1-201ENST00000255465 EYA3Q99504 573 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 EPAS1Q99814 870 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 ANKRD2Q9GZV1 360 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 PLEKHA4Q9H4M7 779 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 SCN9AQ15858 1988 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 FZD9O00144 591 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 LMNB2Q03252 620 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 MTX1Q13505 466 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 CUL3Q13618 768 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 CAMK4Q16566 473 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 WHAMMP3Q1A5X7 153 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
CCNA1-201ENST00000255465 CYB5D1Q6P9G0 228 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 BZW1Q7L1Q6 419 aaKnown RBP13.23□□□□□ -0.29
CCNA1-201ENST00000255465 NIM1KQ8IY84 436 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 TEX9Q8N6V9 391 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 GBP7Q8N8V2 638 aaPredicted RBP13.23□□□□□ -0.29
CCNA1-201ENST00000255465 HELBQ8NG08 1087 aaPredicted RBP13.23□□□□□ -0.29
CCNA1-201ENST00000255465 GORASP1Q9BQQ3 440 aa13.23□□□□□ -0.29
CCNA1-201ENST00000255465 PAPOLBQ9NRJ5 636 aaKnown RBP13.23□□□□□ -0.29
CCNA1-201ENST00000255465 GRIN2DO15399 1336 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 GLTPD2A6NH11 291 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 CBFA2T2O43439 604 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 TAF5LO75529 589 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 RANBP1P43487 201 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 PTPN12Q05209 780 aaKnown RBP13.22□□□□□ -0.29
CCNA1-201ENST00000255465 RIPK1Q13546 671 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 LRRC24Q50LG9 513 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 CCDC181Q5TID7 509 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 CCDC13Q8IYE1 715 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 SMARCC2Q8TAQ2 1214 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 ZC3H12CQ9C0D7 883 aaKnown RBP13.22□□□□□ -0.29
CCNA1-201ENST00000255465 UTP6Q9NYH9 597 aaKnown RBP13.22□□□□□ -0.29
CCNA1-201ENST00000255465 LEMD3Q9Y2U8 911 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms