RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LETM1O95202 739 aaPredicted RBP21.66■■□□□ 1.06
TRIM47-201ENST00000254816 SLFN13Q68D06 897 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 ENGASEQ8NFI3 743 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 TNMDQ9H2S6 317 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 CLSTN2Q9H4D0 955 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 A0A1W2PQ27 194 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 A0A1W2PQ64 194 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 A0A1W2PQD8 194 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 CALML3P27482 149 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 NDUFA8P51970 172 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 NAPAP54920 295 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 CKAP2LQ8IYA6 745 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 ADGRF4Q8IZF3 695 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 SYT17Q9BSW7 474 aa21.66■■□□□ 1.06
TRIM47-201ENST00000254816 LMNB1P20700 586 aa21.65■■□□□ 1.06
TRIM47-201ENST00000254816 TNNI2P48788 182 aa21.65■■□□□ 1.06
TRIM47-201ENST00000254816 KIF4BQ2VIQ3 1234 aa21.65■■□□□ 1.06
TRIM47-201ENST00000254816 JMJD4Q9H9V9 463 aa21.65■■□□□ 1.06
TRIM47-201ENST00000254816 HACL1Q9UJ83 578 aa21.65■■□□□ 1.06
TRIM47-201ENST00000254816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.64■■□□□ 1.06
TRIM47-201ENST00000254816 A0A1W2PRG0 241 aa21.64■■□□□ 1.06
TRIM47-201ENST00000254816 F5H6K3 240 aa21.64■■□□□ 1.06
TRIM47-201ENST00000254816 SLC1A4P43007 532 aa21.64■■□□□ 1.06
TRIM47-201ENST00000254816 FAM160A1Q05DH4 1040 aa21.64■■□□□ 1.06
TRIM47-201ENST00000254816 KLRC3Q07444 240 aa21.64■■□□□ 1.06
TRIM47-201ENST00000254816 CCDC148Q8NFR7 591 aa21.64■■□□□ 1.06
TRIM47-201ENST00000254816 NUP88Q99567 741 aaPredicted RBP21.64■■□□□ 1.06
TRIM47-201ENST00000254816 ECE1P42892 770 aa21.64■■□□□ 1.05
TRIM47-201ENST00000254816 MAP3K11Q16584 847 aa21.64■■□□□ 1.05
TRIM47-201ENST00000254816 GPATCH4Q5T3I0 446 aaKnown RBP21.64■■□□□ 1.05
TRIM47-201ENST00000254816 JMYQ8N9B5 988 aa21.64■■□□□ 1.05
TRIM47-201ENST00000254816 COA7Q96BR5 231 aa21.64■■□□□ 1.05
TRIM47-201ENST00000254816 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.64■■□□□ 1.05
TRIM47-201ENST00000254816 USP17L10C9JJH3 530 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 MMP14P50281 582 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 GRIN1Q05586 938 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 SHC4Q6S5L8 630 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 FMR1NBQ8N0W7 255 aaPredicted RBP21.63■■□□□ 1.05
TRIM47-201ENST00000254816 ZBTB21Q9ULJ3 1066 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 NOL7Q9UMY1 257 aaKnown RBP21.63■■□□□ 1.05
TRIM47-201ENST00000254816 PCDHA6Q9UN73 950 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 PCDHA8Q9Y5H6 950 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 M0R2N6 131 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 TBC1D12O60347 775 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 ZNF174Q15697 407 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 TEPSINQ96N21 525 aa21.63■■□□□ 1.05
TRIM47-201ENST00000254816 NAP1L5Q96NT1 182 aaPredicted RBP21.63■■□□□ 1.05
TRIM47-201ENST00000254816 SMCO2A6NFE2 343 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 TRIM75PA6NK02 468 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 NDUFB10O96000 172 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 SPECC1Q5M775 1068 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 ILDR2Q71H61 639 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 ACER1Q8TDN7 264 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 DCAF4Q8WV16 495 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 FUCA2Q9BTY2 467 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 PFKFB1P16118 471 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 CMA1P23946 247 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 MSNP26038 577 aaKnown RBP21.62■■□□□ 1.05
TRIM47-201ENST00000254816 TTC38Q5R3I4 469 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 ZMYND12Q9H0C1 365 aa21.62■■□□□ 1.05
TRIM47-201ENST00000254816 FBXO2Q9UK22 296 aaPredicted RBP21.62■■□□□ 1.05
TRIM47-201ENST00000254816 H7C1D1 291 aa21.61■■□□□ 1.05
TRIM47-201ENST00000254816 KINO60870 393 aaKnown RBP21.61■■□□□ 1.05
TRIM47-201ENST00000254816 PPP1R11O60927 126 aaPredicted RBP21.61■■□□□ 1.05
TRIM47-201ENST00000254816 YBX3P16989 372 aaKnown RBP eCLIP21.61■■□□□ 1.05
TRIM47-201ENST00000254816 CCDC84Q86UT8 332 aaPredicted RBP21.61■■□□□ 1.05
TRIM47-201ENST00000254816 SPICE1Q8N0Z3 855 aa21.61■■□□□ 1.05
TRIM47-201ENST00000254816 KRI1Q8N9T8 703 aaKnown RBP21.61■■□□□ 1.05
TRIM47-201ENST00000254816 DAGLBQ8NCG7 672 aa21.61■■□□□ 1.05
TRIM47-201ENST00000254816 TRPM4Q8TD43 1214 aa21.61■■□□□ 1.05
TRIM47-201ENST00000254816 POLR2AP24928 1970 aaKnown RBP21.61■■□□□ 1.05
TRIM47-201ENST00000254816 CUTAO60888 179 aa21.6■■□□□ 1.05
TRIM47-201ENST00000254816 TNFAIP1Q13829 316 aa21.6■■□□□ 1.05
TRIM47-201ENST00000254816 GMCL1P1Q8NEA9 526 aa21.6■■□□□ 1.05
TRIM47-201ENST00000254816 CEP131Q9UPN4 1083 aa21.6■■□□□ 1.05
TRIM47-201ENST00000254816 CAP2P40123 477 aa21.6■■□□□ 1.05
TRIM47-201ENST00000254816 CCDC12Q8WUD4 166 aaPredicted RBP21.6■■□□□ 1.05
TRIM47-201ENST00000254816 GPRC5DQ9NZD1 345 aa21.6■■□□□ 1.05
TRIM47-201ENST00000254816 PNMA6FA0A0J9YX94 578 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 HS1BP3Q53T59 392 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 KIAA1755Q5JYT7 1200 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 GPC2Q8N158 579 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 DEFB129Q9H1M3 183 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.59■■□□□ 1.05
TRIM47-201ENST00000254816 CCDC194A0A1B0GVG4 234 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 PTPREP23469 700 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 EPS15P42566 896 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 SNAP25P60880 206 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 MAP3K10Q02779 954 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 ANGEL2Q5VTE6 544 aaKnown RBP21.59■■□□□ 1.05
TRIM47-201ENST00000254816 RESP18Q5W5W9 173 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 GALNT17Q6IS24 598 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 RBM43Q6ZSC3 357 aaKnown RBP21.59■■□□□ 1.05
TRIM47-201ENST00000254816 ERCC4Q92889 916 aaPredicted RBP21.59■■□□□ 1.05
TRIM47-201ENST00000254816 ARHGEF10LQ9HCE6 1279 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 C6orf50Q9HD87 102 aa21.59■■□□□ 1.05
TRIM47-201ENST00000254816 ZNF202O95125 648 aa21.58■■□□□ 1.05
TRIM47-201ENST00000254816 MCM7P33993 719 aa21.58■■□□□ 1.05
TRIM47-201ENST00000254816 ZYXQ15942 572 aaKnown RBP21.58■■□□□ 1.05
TRIM47-201ENST00000254816 PRAMEF18Q5VWM3 479 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms