RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 VSTM4Q8IW00 320 aa28.59■■■□□ 2.17
TMEM55B-201ENST00000250489 USP27XA6NNY8 438 aa28.59■■■□□ 2.17
TMEM55B-201ENST00000250489 USP17L5A8MUK1 530 aa28.59■■■□□ 2.17
TMEM55B-201ENST00000250489 AKR1B1P15121 316 aa28.59■■■□□ 2.17
TMEM55B-201ENST00000250489 HHIPL2Q6UWX4 724 aa28.59■■■□□ 2.17
TMEM55B-201ENST00000250489 G3V3G9 751 aa28.58■■■□□ 2.17
TMEM55B-201ENST00000250489 TNNT1P13805 278 aa28.58■■■□□ 2.17
TMEM55B-201ENST00000250489 DCAF8Q5TAQ9 597 aa28.58■■■□□ 2.17
TMEM55B-201ENST00000250489 MSL1Q68DK7 614 aa28.58■■■□□ 2.17
TMEM55B-201ENST00000250489 HOMER1Q86YM7 354 aa28.58■■■□□ 2.17
TMEM55B-201ENST00000250489 INTS13Q9NVM9 706 aa28.58■■■□□ 2.17
TMEM55B-201ENST00000250489 TMEM232C9JQI7 657 aa28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 PDHBP11177 359 aa28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 CDC42EP5Q6NZY7 148 aa28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 SEC63Q9UGP8 760 aaKnown RBP28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 SWAP70Q9UH65 585 aa28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 ZNF622Q969S3 477 aaKnown RBP eCLIP28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 TEKT1Q969V4 418 aa28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 PIGSQ96S52 555 aa28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 TMEM60Q9H2L4 133 aa28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 SERPINB13Q9UIV8 391 aa28.57■■■□□ 2.16
TMEM55B-201ENST00000250489 MYO3BQ8WXR4 1341 aa28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 MYH8P13535 1937 aa28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 CD44P16070 742 aaKnown RBP28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 CUL4BQ13620 913 aa28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 HSP90AA4PQ58FG1 418 aa28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 APOBEC3HQ6NTF7 200 aaKnown RBP28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 CCAR2Q8N163 923 aaKnown RBP28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 STAMQ92783 540 aa28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 RIOX1Q9H6W3 641 aa28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 C6orf50Q9HD87 102 aa28.56■■■□□ 2.16
TMEM55B-201ENST00000250489 TXLNAP40222 546 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 DTHD1Q6ZMT9 781 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 KRT25Q7Z3Z0 450 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 MTRQ99707 1265 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 VAT1LQ9HCJ6 419 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 SMCO2A6NFE2 343 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 GTPBP6O43824 516 aaPredicted RBP28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 PODNQ7Z5L7 613 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 C2CD5Q86YS7 1000 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 UBA5Q9GZZ9 404 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 SAMSN1Q9NSI8 373 aaKnown RBP28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 C10orf71Q711Q0 1435 aa28.55■■■□□ 2.16
TMEM55B-201ENST00000250489 LAD1O00515 517 aa28.54■■■□□ 2.16
TMEM55B-201ENST00000250489 RIOK3O14730 519 aaKnown RBP28.54■■■□□ 2.16
TMEM55B-201ENST00000250489 CDK11BP21127 795 aaKnown RBP28.54■■■□□ 2.16
TMEM55B-201ENST00000250489 GNA11P29992 359 aa28.54■■■□□ 2.16
TMEM55B-201ENST00000250489 KCNJ6P48051 423 aa28.54■■■□□ 2.16
TMEM55B-201ENST00000250489 ASPRV1Q53RT3 343 aa28.54■■■□□ 2.16
TMEM55B-201ENST00000250489 LRRC47Q8N1G4 583 aaKnown RBP28.54■■■□□ 2.16
TMEM55B-201ENST00000250489 DBNDD1Q9H9R9 158 aa28.54■■■□□ 2.16
TMEM55B-201ENST00000250489 PPP1R3GB7ZBB8 358 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 SNHG28P0DPA3 235 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 SHMT1P34896 483 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 SOGA3Q5TF21 947 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 NYAP1Q6ZVC0 841 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 BLZF1Q9H2G9 400 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 FRMPD2Q68DX3 1309 aaPredicted RBP28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 SYNRGQ9UMZ2 1314 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 NRDCO43847 1150 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 CDC25AP30304 524 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 PRPHP41219 470 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 NONOQ15233 471 aaKnown RBP eCLIP28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 SPATA1Q5VX52 437 aa28.53■■■□□ 2.16
TMEM55B-201ENST00000250489 ESYT2A0FGR8 921 aa28.52■■■□□ 2.16
TMEM55B-201ENST00000250489 CRKP46108 304 aa28.52■■■□□ 2.16
TMEM55B-201ENST00000250489 CLEC10AQ8IUN9 316 aa28.52■■■□□ 2.16
TMEM55B-201ENST00000250489 KCNQ5Q9NR82 932 aa28.52■■■□□ 2.16
TMEM55B-201ENST00000250489 hCG_1984214I3L0E3 225 aa28.51■■■□□ 2.16
TMEM55B-201ENST00000250489 KARSQ15046 597 aaKnown RBP28.51■■■□□ 2.16
TMEM55B-201ENST00000250489 E4F1Q66K89 784 aaPredicted RBP28.51■■■□□ 2.16
TMEM55B-201ENST00000250489 STYK1Q6J9G0 422 aa28.51■■■□□ 2.16
TMEM55B-201ENST00000250489 KLHL10Q6JEL2 608 aa28.51■■■□□ 2.16
TMEM55B-201ENST00000250489 SMYD4Q8IYR2 804 aaPredicted RBP28.51■■■□□ 2.16
TMEM55B-201ENST00000250489 ZNF713Q8N859 430 aaPredicted RBP28.51■■■□□ 2.16
TMEM55B-201ENST00000250489 DISC1Q9NRI5 854 aa28.51■■■□□ 2.16
TMEM55B-201ENST00000250489 TRMT1Q9NXH9 659 aaKnown RBP28.51■■■□□ 2.16
TMEM55B-201ENST00000250489 TTLL1O95922 423 aa28.51■■■□□ 2.15
TMEM55B-201ENST00000250489 STAT6P42226 847 aa28.51■■■□□ 2.15
TMEM55B-201ENST00000250489 EIF6P56537 245 aaKnown RBP28.51■■■□□ 2.15
TMEM55B-201ENST00000250489 TNS1Q9HBL0 1735 aaKnown RBP28.51■■■□□ 2.15
TMEM55B-201ENST00000250489 HLA-DOAP06340 250 aa28.5■■■□□ 2.15
TMEM55B-201ENST00000250489 NFIAQ12857 509 aa28.5■■■□□ 2.15
TMEM55B-201ENST00000250489 PTPN21Q16825 1174 aa28.5■■■□□ 2.15
TMEM55B-201ENST00000250489 ZDHHC15Q96MV8 337 aa28.5■■■□□ 2.15
TMEM55B-201ENST00000250489 GREB1LQ9C091 1923 aaPredicted RBP28.5■■■□□ 2.15
TMEM55B-201ENST00000250489 TBX2Q13207 712 aaPredicted RBP28.5■■■□□ 2.15
TMEM55B-201ENST00000250489 PTPN14Q15678 1187 aa28.5■■■□□ 2.15
TMEM55B-201ENST00000250489 CEP135Q66GS9 1140 aa28.5■■■□□ 2.15
TMEM55B-201ENST00000250489 CCSER1Q9C0I3 900 aa28.5■■■□□ 2.15
TMEM55B-201ENST00000250489 PP2D1A8MPX8 630 aa28.49■■■□□ 2.15
TMEM55B-201ENST00000250489 H0YIN7 160 aa28.49■■■□□ 2.15
TMEM55B-201ENST00000250489 STX17P56962 302 aa28.49■■■□□ 2.15
TMEM55B-201ENST00000250489 CCDC112Q8NEF3 446 aa28.49■■■□□ 2.15
TMEM55B-201ENST00000250489 EHD4Q9H223 541 aa28.49■■■□□ 2.15
TMEM55B-201ENST00000250489 TMX1Q9H3N1 280 aa28.49■■■□□ 2.15
TMEM55B-201ENST00000250489 PAXBP1Q9Y5B6 917 aa28.49■■■□□ 2.15
TMEM55B-201ENST00000250489 PSDA5PKW4 1024 aaPredicted RBP28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 FKBP1AP62942 108 aaKnown RBP28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 RBM10P98175 930 aaKnown RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms