RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 RRAGBQ5VZM2 374 aa22.12■■□□□ 1.13
CDC42EP1-201ENST00000249014 C16orf86Q6ZW13 317 aa22.12■■□□□ 1.13
CDC42EP1-201ENST00000249014 EYA3Q99504 573 aa22.12■■□□□ 1.13
CDC42EP1-201ENST00000249014 GGA1Q9UJY5 639 aa22.12■■□□□ 1.13
CDC42EP1-201ENST00000249014 FLT1P17948 1338 aa22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 SERPINB2P05120 415 aa22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 ATP2B4P23634 1241 aa22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 TEX11Q8IYF3 940 aa22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 CCDC148Q8NFR7 591 aa22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 PP2D1A8MPX8 630 aa22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 KLRF2D3W0D1 207 aa22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 RHBDL3P58872 404 aa22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 KMT5BQ4FZB7 885 aa22.11■■□□□ 1.13
CDC42EP1-201ENST00000249014 AKR1B15C9JRZ8 316 aaPredicted RBP22.1■■□□□ 1.13
CDC42EP1-201ENST00000249014 RBL2Q08999 1139 aa22.1■■□□□ 1.13
CDC42EP1-201ENST00000249014 NAALADL2Q58DX5 795 aa22.1■■□□□ 1.13
CDC42EP1-201ENST00000249014 MFSD14BQ5SR56 506 aa22.1■■□□□ 1.13
CDC42EP1-201ENST00000249014 IGSF22Q8N9C0 903 aa22.1■■□□□ 1.13
CDC42EP1-201ENST00000249014 CTAGE1Q96RT6 745 aa22.1■■□□□ 1.13
CDC42EP1-201ENST00000249014 DISC1Q9NRI5 854 aa22.1■■□□□ 1.13
CDC42EP1-201ENST00000249014 POLLQ9UGP5 575 aa22.1■■□□□ 1.13
CDC42EP1-201ENST00000249014 SPATA31A6Q5VVP1 1343 aa22.1■■□□□ 1.13
CDC42EP1-201ENST00000249014 RPN1P04843 607 aaKnown RBP22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 STAT6P42226 847 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 ST5P78524 1137 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 MTF1Q14872 753 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 ZNF658Q5TYW1 1059 aaPredicted RBP22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 GALNT17Q6IS24 598 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 DTHD1Q6ZMT9 781 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 FAM177A1Q8N128 213 aaPredicted RBP22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 TXLNAP40222 546 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 CERS3Q8IU89 383 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 NEDD1Q8NHV4 660 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 RBM17Q96I25 401 aaKnown RBP22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 PANX2Q96RD6 677 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 DESI2Q9BSY9 194 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 ZNF287Q9HBT7 754 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 RWDD2AQ9UIY3 292 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 GDAQ9Y2T3 454 aa22.09■■□□□ 1.13
CDC42EP1-201ENST00000249014 ERCC6LQ2NKX8 1250 aa22.08■■□□□ 1.13
CDC42EP1-201ENST00000249014 FBXO38Q6PIJ6 1188 aa22.08■■□□□ 1.13
CDC42EP1-201ENST00000249014 USP17L2Q6R6M4 530 aa22.08■■□□□ 1.13
CDC42EP1-201ENST00000249014 ZNF397Q8NF99 534 aaPredicted RBP22.08■■□□□ 1.13
CDC42EP1-201ENST00000249014 TBC1D16Q8TBP0 767 aa22.08■■□□□ 1.13
CDC42EP1-201ENST00000249014 CPLX3Q8WVH0 158 aa22.08■■□□□ 1.13
CDC42EP1-201ENST00000249014 SPZ1Q9BXG8 430 aa22.08■■□□□ 1.13
CDC42EP1-201ENST00000249014 FOCADQ5VW36 1801 aa22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 SOWAHDA6NJG2 315 aa22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 CCT6AP40227 531 aaKnown RBP22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 PAK1Q13153 545 aa22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 KRT31Q15323 416 aa22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 FEZ1Q99689 392 aa22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 LZTS2Q9BRK4 669 aa22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 ZMYND12Q9H0C1 365 aa22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 MAPK8IP1Q9UQF2 711 aa22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 PARP3Q9Y6F1 533 aa22.08■■□□□ 1.12
CDC42EP1-201ENST00000249014 NELFBQ8WX92 580 aa22.07■■□□□ 1.12
CDC42EP1-201ENST00000249014 CEP95Q96GE4 821 aa22.07■■□□□ 1.12
CDC42EP1-201ENST00000249014 FAM163AQ96GL9 167 aaPredicted RBP22.07■■□□□ 1.12
CDC42EP1-201ENST00000249014 WDR24Q96S15 920 aa22.07■■□□□ 1.12
CDC42EP1-201ENST00000249014 MYH8P13535 1937 aa22.07■■□□□ 1.12
CDC42EP1-201ENST00000249014 PARP1P09874 1014 aaKnown RBP22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 PRCPP42785 496 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 FILIP1LQ4L180 1135 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 PPFIBP1Q86W92 1011 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 LRRC15Q8TF66 581 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 RMND1Q9NWS8 449 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 PODXL2Q9NZ53 605 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 LIMA1Q9UHB6 759 aaKnown RBP22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 LTBP1Q14766 1721 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 GAKO14976 1311 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 LRRC10BA6NIK2 292 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 URI1O94763 535 aaPredicted RBP22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 PLCG2P16885 1265 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 SEPT12Q8IYM1 358 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 PLIN2Q99541 437 aa22.06■■□□□ 1.12
CDC42EP1-201ENST00000249014 GOLGA6L9A6NEM1 432 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 ONECUT3O60422 494 aaPredicted RBP22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 BBOX1O75936 387 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 GYPCP04921 128 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 NAPAP54920 295 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 DDR1Q08345 913 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 RAD9BQ6WBX8 426 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 MRPL44Q9H9J2 332 aaKnown RBP22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 MFAP3LO75121 409 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 CASP14P31944 242 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 GNG11P61952 73 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 CCSER1Q9C0I3 900 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 PRDM10Q9NQV6 1147 aa22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 DDX41Q9UJV9 622 aaKnown RBP22.05■■□□□ 1.12
CDC42EP1-201ENST00000249014 HOXA10P31260 410 aaPredicted RBP22.04■■□□□ 1.12
CDC42EP1-201ENST00000249014 FXR1P51114 621 aaKnown RBP eCLIP22.04■■□□□ 1.12
CDC42EP1-201ENST00000249014 SMAP1Q8IYB5 467 aaPredicted RBP22.04■■□□□ 1.12
CDC42EP1-201ENST00000249014 VPS16Q9H269 839 aa22.04■■□□□ 1.12
CDC42EP1-201ENST00000249014 LAD1O00515 517 aa22.04■■□□□ 1.12
CDC42EP1-201ENST00000249014 UBA7P41226 1012 aa22.04■■□□□ 1.12
CDC42EP1-201ENST00000249014 TCP11X2Q5H9J9 407 aa22.04■■□□□ 1.12
CDC42EP1-201ENST00000249014 RASSF8Q8NHQ8 419 aa22.04■■□□□ 1.12
CDC42EP1-201ENST00000249014 ITIH6Q6UXX5 1313 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms