RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 SPTBN4Q9H254 2564 aa14.6□□□□□ -0.07
RFPL3-201ENST00000249007 ZBBXA8MT70 800 aa14.59□□□□□ -0.07
RFPL3-201ENST00000249007 SRGAP3O43295 1099 aa14.59□□□□□ -0.07
RFPL3-201ENST00000249007 CD4P01730 458 aa14.59□□□□□ -0.07
RFPL3-201ENST00000249007 CA3P07451 260 aa14.59□□□□□ -0.07
RFPL3-201ENST00000249007 IRX5P78411 483 aaPredicted RBP14.59□□□□□ -0.07
RFPL3-201ENST00000249007 CERS4Q9HA82 394 aa14.59□□□□□ -0.07
RFPL3-201ENST00000249007 SPC25Q9HBM1 224 aa14.59□□□□□ -0.07
RFPL3-201ENST00000249007 DAXXQ9UER7 740 aaPredicted RBP14.59□□□□□ -0.07
RFPL3-201ENST00000249007 ZHX1Q9UKY1 873 aaPredicted RBP14.59□□□□□ -0.07
RFPL3-201ENST00000249007 UMODL1Q5DID0 1318 aa14.59□□□□□ -0.07
RFPL3-201ENST00000249007 MPHOSPH10O00566 681 aaKnown RBP14.58□□□□□ -0.08
RFPL3-201ENST00000249007 TMEM67Q5HYA8 995 aa14.58□□□□□ -0.08
RFPL3-201ENST00000249007 GNASQ5JWF2 1037 aa14.58□□□□□ -0.08
RFPL3-201ENST00000249007 KIAA1755Q5JYT7 1200 aa14.58□□□□□ -0.08
RFPL3-201ENST00000249007 SPICE1Q8N0Z3 855 aa14.58□□□□□ -0.08
RFPL3-201ENST00000249007 MSL3Q8N5Y2 521 aaKnown RBP14.58□□□□□ -0.08
RFPL3-201ENST00000249007 ZNF318Q5VUA4 2279 aa14.58□□□□□ -0.08
RFPL3-201ENST00000249007 EPOPA6NHQ4 379 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 CYP2E1P05181 493 aaPredicted RBP14.57□□□□□ -0.08
RFPL3-201ENST00000249007 CYP7A1P22680 504 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 CCL23P55773 120 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 CSPP1Q1MSJ5 1256 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 CERS3Q8IU89 383 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 RIOX2Q8IUF8 465 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 MIGA1Q8NAN2 632 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 MYO5AQ9Y4I1 1855 aaKnown RBP14.57□□□□□ -0.08
RFPL3-201ENST00000249007 COL11A1P12107 1806 aaPredicted RBP14.57□□□□□ -0.08
RFPL3-201ENST00000249007 IGSF3O75054 1194 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 SNAI1O95863 264 aaPredicted RBP14.57□□□□□ -0.08
RFPL3-201ENST00000249007 PLCD1P51178 756 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 TTC39AQ5SRH9 613 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 RPUSD2Q8IZ73 545 aaKnown RBP14.57□□□□□ -0.08
RFPL3-201ENST00000249007 ARNTL2Q8WYA1 636 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 FBXL18Q96ME1 805 aa14.57□□□□□ -0.08
RFPL3-201ENST00000249007 STAT3P40763 770 aa14.56□□□□□ -0.08
RFPL3-201ENST00000249007 GJA9P57773 515 aa14.56□□□□□ -0.08
RFPL3-201ENST00000249007 GJD3Q8N144 294 aa14.56□□□□□ -0.08
RFPL3-201ENST00000249007 MEIS3Q99687 375 aa14.56□□□□□ -0.08
RFPL3-201ENST00000249007 NOC4LQ9BVI4 516 aaKnown RBP14.56□□□□□ -0.08
RFPL3-201ENST00000249007 UPF3AQ9H1J1 476 aaKnown RBP14.56□□□□□ -0.08
RFPL3-201ENST00000249007 WNT8AQ9H1J5 351 aa14.56□□□□□ -0.08
RFPL3-201ENST00000249007 PARP14Q460N5 1801 aa14.55□□□□□ -0.08
RFPL3-201ENST00000249007 ADCY6O43306 1168 aa14.55□□□□□ -0.08
RFPL3-201ENST00000249007 ALADP13716 330 aa14.55□□□□□ -0.08
RFPL3-201ENST00000249007 COPB2P35606 906 aa14.55□□□□□ -0.08
RFPL3-201ENST00000249007 MAMDC4Q6UXC1 1216 aa14.55□□□□□ -0.08
RFPL3-201ENST00000249007 KCNH6Q9H252 994 aa14.55□□□□□ -0.08
RFPL3-201ENST00000249007 MRS2Q9HD23 443 aa14.55□□□□□ -0.08
RFPL3-201ENST00000249007 PIH1D3Q9NQM4 214 aaKnown RBP14.55□□□□□ -0.08
RFPL3-201ENST00000249007 ADAMTS5Q9UNA0 930 aa14.55□□□□□ -0.08
RFPL3-201ENST00000249007 ZFHX2Q9C0A1 2572 aaPredicted RBP14.54□□□□□ -0.08
RFPL3-201ENST00000249007 WDR46O15213 610 aaKnown RBP14.54□□□□□ -0.08
RFPL3-201ENST00000249007 POLR3DP05423 398 aaPredicted RBP14.54□□□□□ -0.08
RFPL3-201ENST00000249007 MTX1Q13505 466 aa14.54□□□□□ -0.08
RFPL3-201ENST00000249007 ACVR2BQ13705 512 aa14.54□□□□□ -0.08
RFPL3-201ENST00000249007 CCDC144BQ3MJ40 725 aa14.54□□□□□ -0.08
RFPL3-201ENST00000249007 CCDC158Q5M9N0 1113 aa14.54□□□□□ -0.08
RFPL3-201ENST00000249007 TMEM179Q6ZVK1 233 aa14.54□□□□□ -0.08
RFPL3-201ENST00000249007 SH2D4AQ9H788 454 aa14.54□□□□□ -0.08
RFPL3-201ENST00000249007 VCPKMTQ9H867 229 aa14.54□□□□□ -0.08
RFPL3-201ENST00000249007 MCM3APO60318 1980 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 IDH1O75874 414 aaKnown RBP14.53□□□□□ -0.08
RFPL3-201ENST00000249007 SSTR3P32745 418 aaPredicted RBP14.53□□□□□ -0.08
RFPL3-201ENST00000249007 ZAP70P43403 619 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 TAP1Q03518 808 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 GABPAQ06546 454 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 GRB10Q13322 594 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 TTLL4Q14679 1199 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 CXCL17Q6UXB2 119 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 FAM178BQ8IXR5 827 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 SLC43A3Q8NBI5 491 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 DDX11Q96FC9 970 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 SCLYQ96I15 445 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 ARHGEF10LQ9HCE6 1279 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 SMC4Q9NTJ3 1288 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 FBXO28Q9NVF7 368 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 ZNF214Q9UL59 606 aaPredicted RBP14.53□□□□□ -0.08
RFPL3-201ENST00000249007 TMX2Q9Y320 296 aa14.53□□□□□ -0.08
RFPL3-201ENST00000249007 CACNA1HO95180 2353 aa14.52□□□□□ -0.08
RFPL3-201ENST00000249007 PTPRZ1P23471 2315 aaPredicted RBP14.52□□□□□ -0.08
RFPL3-201ENST00000249007 C5orf42Q9H799 3197 aa14.52□□□□□ -0.08
RFPL3-201ENST00000249007 VWA5AO00534 786 aa14.52□□□□□ -0.08
RFPL3-201ENST00000249007 PFKMP08237 780 aa14.52□□□□□ -0.08
RFPL3-201ENST00000249007 G3BP1Q13283 466 aaKnown RBP eCLIP14.52□□□□□ -0.08
RFPL3-201ENST00000249007 CLEC10AQ8IUN9 316 aa14.52□□□□□ -0.08
RFPL3-201ENST00000249007 MIER1Q8N108 512 aa14.52□□□□□ -0.08
RFPL3-201ENST00000249007 VWCEQ96DN2 955 aa14.52□□□□□ -0.08
RFPL3-201ENST00000249007 TRPV6Q9H1D0 765 aa14.52□□□□□ -0.08
RFPL3-201ENST00000249007 ABHD16BQ9H3Z7 469 aa14.52□□□□□ -0.08
RFPL3-201ENST00000249007 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.52□□□□□ -0.08
RFPL3-201ENST00000249007 CTAGE5O15320 804 aa14.51□□□□□ -0.09
RFPL3-201ENST00000249007 BEX3Q00994 111 aa14.51□□□□□ -0.09
RFPL3-201ENST00000249007 ICA1Q05084 483 aa14.51□□□□□ -0.09
RFPL3-201ENST00000249007 ITGA7Q13683 1181 aa14.51□□□□□ -0.09
RFPL3-201ENST00000249007 ZNF467Q7Z7K2 595 aaPredicted RBP14.51□□□□□ -0.09
RFPL3-201ENST00000249007 MAGEB6Q8N7X4 407 aa14.51□□□□□ -0.09
RFPL3-201ENST00000249007 DBNDD2Q9BQY9 259 aa14.51□□□□□ -0.09
RFPL3-201ENST00000249007 DNAJC25-GNG10A0A024R161 153 aa14.5□□□□□ -0.09
RFPL3-201ENST00000249007 B4GALT4O60513 344 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms