RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 BTNL9Q6UXG8 535 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 ILDR2Q71H61 639 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
SDF2-201ENST00000247020 ADGRF4Q8IZF3 695 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 UBA5Q9GZZ9 404 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 DEFB129Q9H1M3 183 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 JMJD4Q9H9V9 463 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 RNF181Q9P0P0 153 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 TRIM75PA6NK02 468 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 ZBTB5O15062 677 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 CUTAO60888 179 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 VEGFAP15692 232 aaPredicted RBP16.26■□□□□ 0.19
SDF2-201ENST00000247020 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■□□□□ 8.7
SDF2-201ENST00000247020 DEKP35659 375 aaKnown RBP16.26■□□□□ 0.19
SDF2-201ENST00000247020 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 SHROOM1Q2M3G4 852 aaPredicted RBP16.26■□□□□ 0.19
SDF2-201ENST00000247020 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 NUP62CLQ9H1M0 184 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 GOLGB1Q14789 3259 aaKnown RBP16.26■□□□□ 0.19
SDF2-201ENST00000247020 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 SYCE3A1L190 88 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 PHF20L1A8MW92 1017 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 CTAGE5O15320 804 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 CTNND1O60716 968 aaKnown RBP16.26■□□□□ 0.19
SDF2-201ENST00000247020 PLA2G6O60733 806 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 NDUFB10O96000 172 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 BMP3P12645 472 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 CMA1P23946 247 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
SDF2-201ENST00000247020 AXDND1Q5T1B0 1012 aaPredicted RBP16.26■□□□□ 0.19
SDF2-201ENST00000247020 KCTD1Q719H9 257 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 HOMER1Q86YM7 354 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 TEX2Q8IWB9 1127 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 CDAN1Q8IWY9 1227 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 ENGASEQ8NFI3 743 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 CPVLQ9H3G5 476 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 ADARB2Q9NS39 739 aaKnown RBP16.26■□□□□ 0.19
SDF2-201ENST00000247020 DACT1Q9NYF0 836 aa16.26■□□□□ 0.19
SDF2-201ENST00000247020 A0A1W2PRG0 241 aa16.25■□□□□ 0.19
SDF2-201ENST00000247020 MRE11P49959 708 aa16.25■□□□□ 0.19
SDF2-201ENST00000247020 RBM43Q6ZSC3 357 aaKnown RBP16.25■□□□□ 0.19
SDF2-201ENST00000247020 MIGA2Q7L4E1 593 aa16.25■□□□□ 0.19
SDF2-201ENST00000247020 KRT25Q7Z3Z0 450 aa16.25■□□□□ 0.19
SDF2-201ENST00000247020 KRI1Q8N9T8 703 aaKnown RBP16.25■□□□□ 0.19
SDF2-201ENST00000247020 FSIP1Q8NA03 581 aa16.25■□□□□ 0.19
SDF2-201ENST00000247020 ZNF579Q8NAF0 562 aaKnown RBP16.25■□□□□ 0.19
SDF2-201ENST00000247020 TRPM4Q8TD43 1214 aa16.25■□□□□ 0.19
SDF2-201ENST00000247020 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
SDF2-201ENST00000247020 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
SDF2-201ENST00000247020 CCDC194A0A1B0GVG4 234 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 SMCO2A6NFE2 343 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 NR1I2O75469 434 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 PTPREP23469 700 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 TRAF1Q13077 416 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 ORC2Q13416 577 aaPredicted RBP16.24■□□□□ 0.19
SDF2-201ENST00000247020 TTC38Q5R3I4 469 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 ANGEL2Q5VTE6 544 aaKnown RBP16.24■□□□□ 0.19
SDF2-201ENST00000247020 TTBK2Q6IQ55 1244 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 ZNF341Q9BYN7 854 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 VCPKMTQ9H867 229 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 ZNF112Q9UJU3 913 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 PCDHA6Q9UN73 950 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 PCDHB6Q9Y5E3 794 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 PCDHA8Q9Y5H6 950 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 SRPRBQ9Y5M8 271 aaKnown RBP16.24■□□□□ 0.19
SDF2-201ENST00000247020 SCN4AP35499 1836 aa16.24■□□□□ 0.19
SDF2-201ENST00000247020 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
SDF2-201ENST00000247020 SNW1Q13573 536 aaKnown RBP16.23■□□□□ 0.19
SDF2-201ENST00000247020 MAP3K11Q16584 847 aa16.23■□□□□ 0.19
SDF2-201ENST00000247020 EARS2Q5JPH6 523 aaKnown RBP16.23■□□□□ 0.19
SDF2-201ENST00000247020 C9orf131Q5VYM1 1079 aa16.23■□□□□ 0.19
SDF2-201ENST00000247020 PIK3AP1Q6ZUJ8 805 aa16.23■□□□□ 0.19
SDF2-201ENST00000247020 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
SDF2-201ENST00000247020 ASTN2O75129 1339 aaPredicted RBP16.23■□□□□ 0.19
SDF2-201ENST00000247020 KINO60870 393 aaKnown RBP16.22■□□□□ 0.19
SDF2-201ENST00000247020 MARCKSP29966 332 aaPredicted RBP16.22■□□□□ 0.19
SDF2-201ENST00000247020 EPS15P42566 896 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 SYDE2Q5VT97 1194 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 RESP18Q5W5W9 173 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 DPY19L2Q6NUT2 758 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 GAS2L3Q86XJ1 694 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 FMR1NBQ8N0W7 255 aaPredicted RBP16.22■□□□□ 0.19
SDF2-201ENST00000247020 L3MBTL3Q96JM7 780 aaPredicted RBP16.22■□□□□ 0.19
SDF2-201ENST00000247020 TIGD1Q96MW7 591 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 TNMDQ9H2S6 317 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 GOLPH3LQ9H4A5 285 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 RIC8AQ9NPQ8 531 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 GGA3Q9NZ52 723 aa16.22■□□□□ 0.19
SDF2-201ENST00000247020 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
SDF2-201ENST00000247020 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 USP17L10C9JJH3 530 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 RAD21O60216 631 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 DDNO94850 711 aaPredicted RBP16.21■□□□□ 0.19
SDF2-201ENST00000247020 ECE1P42892 770 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 ADCY7P51828 1080 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 STAT2P52630 851 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 ATP2C1P98194 919 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms