RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 USP17L2Q6R6M4 530 aa17.16■□□□□ 0.34
DDX49-201ENST00000247003 HHIPL2Q6UWX4 724 aa17.16■□□□□ 0.34
DDX49-201ENST00000247003 CERS5Q8N5B7 392 aa17.16■□□□□ 0.34
DDX49-201ENST00000247003 ZMYND12Q9H0C1 365 aa17.16■□□□□ 0.34
DDX49-201ENST00000247003 SERPINB13Q9UIV8 391 aa17.16■□□□□ 0.34
DDX49-201ENST00000247003 RGPD3A6NKT7 1758 aaPredicted RBP17.16■□□□□ 0.34
DDX49-201ENST00000247003 RGPD4Q7Z3J3 1758 aa17.16■□□□□ 0.34
DDX49-201ENST00000247003 SYNRGQ9UMZ2 1314 aa17.16■□□□□ 0.34
DDX49-201ENST00000247003 C10orf71Q711Q0 1435 aa17.15■□□□□ 0.34
DDX49-201ENST00000247003 M0R2N6 131 aa17.15■□□□□ 0.34
DDX49-201ENST00000247003 TNNT1P13805 278 aa17.15■□□□□ 0.34
DDX49-201ENST00000247003 NOVP48745 357 aa17.15■□□□□ 0.34
DDX49-201ENST00000247003 DPYDQ12882 1025 aa17.15■□□□□ 0.34
DDX49-201ENST00000247003 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
DDX49-201ENST00000247003 CCDC112Q8NEF3 446 aa17.15■□□□□ 0.34
DDX49-201ENST00000247003 RMND1Q9NWS8 449 aa17.15■□□□□ 0.34
DDX49-201ENST00000247003 MTMR4Q9NYA4 1195 aa17.15■□□□□ 0.34
DDX49-201ENST00000247003 STAT6P42226 847 aa17.14■□□□□ 0.34
DDX49-201ENST00000247003 SCNN1DP51172 638 aa17.14■□□□□ 0.34
DDX49-201ENST00000247003 GABPAQ06546 454 aa17.14■□□□□ 0.34
DDX49-201ENST00000247003 NONOQ15233 471 aaKnown RBP eCLIP17.14■□□□□ 0.34
DDX49-201ENST00000247003 INF2Q27J81 1249 aa17.14■□□□□ 0.34
DDX49-201ENST00000247003 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.34
DDX49-201ENST00000247003 SMCO2A6NFE2 343 aa17.14■□□□□ 0.33
DDX49-201ENST00000247003 H0YIN7 160 aa17.14■□□□□ 0.33
DDX49-201ENST00000247003 TTLL1O95922 423 aa17.14■□□□□ 0.33
DDX49-201ENST00000247003 FMR1Q06787 632 aaKnown RBP eCLIP17.14■□□□□ 0.33
DDX49-201ENST00000247003 E2F4Q16254 413 aa17.14■□□□□ 0.33
DDX49-201ENST00000247003 SLC35G1Q2M3R5 365 aa17.14■□□□□ 0.33
DDX49-201ENST00000247003 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
DDX49-201ENST00000247003 VSTM4Q8IW00 320 aa17.14■□□□□ 0.33
DDX49-201ENST00000247003 TRMT44Q8IYL2 757 aaKnown RBP17.14■□□□□ 0.33
DDX49-201ENST00000247003 CCP110O43303 1012 aa17.13■□□□□ 0.33
DDX49-201ENST00000247003 GTPBP6O43824 516 aaPredicted RBP17.13■□□□□ 0.33
DDX49-201ENST00000247003 PDHBP11177 359 aa17.13■□□□□ 0.33
DDX49-201ENST00000247003 PRPHP41219 470 aa17.13■□□□□ 0.33
DDX49-201ENST00000247003 KCNJ6P48051 423 aa17.13■□□□□ 0.33
DDX49-201ENST00000247003 PTPN14Q15678 1187 aa17.13■□□□□ 0.33
DDX49-201ENST00000247003 ARMCX5Q6P1M9 558 aa17.13■□□□□ 0.33
DDX49-201ENST00000247003 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
DDX49-201ENST00000247003 PAXBP1Q9Y5B6 917 aa17.13■□□□□ 0.33
DDX49-201ENST00000247003 ADAMTSL1Q8N6G6 1762 aa17.13■□□□□ 0.33
DDX49-201ENST00000247003 ESYT2A0FGR8 921 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 USP17L5A8MUK1 530 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 KIF2AO00139 706 aaPredicted RBP17.12■□□□□ 0.33
DDX49-201ENST00000247003 ADAMTS3O15072 1205 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 AKR1B1P15121 316 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 GTF2F1P35269 517 aaKnown RBP eCLIP17.12■□□□□ 0.33
DDX49-201ENST00000247003 STYK1Q6J9G0 422 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 RASGRP2Q7LDG7 609 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 LRRC47Q8N1G4 583 aaKnown RBP17.12■□□□□ 0.33
DDX49-201ENST00000247003 C4orf32Q8N8J7 132 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 DPF2Q92785 391 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 PIGSQ96S52 555 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 DDX4Q9NQI0 724 aaKnown RBP17.12■□□□□ 0.33
DDX49-201ENST00000247003 DISC1Q9NRI5 854 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 KCND1Q9NSA2 647 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 ZNF18P17022 549 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 UBA7P41226 1012 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 CRKP46108 304 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 ORC2Q13416 577 aaPredicted RBP17.12■□□□□ 0.33
DDX49-201ENST00000247003 IL17AQ16552 155 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 SPATA1Q5VX52 437 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 KLHL10Q6JEL2 608 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 PDXDC2PQ6P474 469 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
DDX49-201ENST00000247003 MXD3Q9BW11 206 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 CPVLQ9H3G5 476 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 RIOX1Q9H6W3 641 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 DBNDD1Q9H9R9 158 aa17.12■□□□□ 0.33
DDX49-201ENST00000247003 FRMPD2Q68DX3 1309 aaPredicted RBP17.12■□□□□ 0.33
DDX49-201ENST00000247003 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
DDX49-201ENST00000247003 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
DDX49-201ENST00000247003 FKBP1AP62942 108 aaKnown RBP17.11■□□□□ 0.33
DDX49-201ENST00000247003 LETM2Q2VYF4 491 aa17.11■□□□□ 0.33
DDX49-201ENST00000247003 HSP90AA4PQ58FG1 418 aa17.11■□□□□ 0.33
DDX49-201ENST00000247003 RRAGBQ5VZM2 374 aa17.11■□□□□ 0.33
DDX49-201ENST00000247003 CEP135Q66GS9 1140 aa17.11■□□□□ 0.33
DDX49-201ENST00000247003 NEK8Q86SG6 692 aa17.11■□□□□ 0.33
DDX49-201ENST00000247003 CCAR2Q8N163 923 aaKnown RBP17.11■□□□□ 0.33
DDX49-201ENST00000247003 AK8Q96MA6 479 aa17.11■□□□□ 0.33
DDX49-201ENST00000247003 CTAGE1Q96RT6 745 aa17.11■□□□□ 0.33
DDX49-201ENST00000247003 TRIM34Q9BYJ4 488 aa17.11■□□□□ 0.33
DDX49-201ENST00000247003 EHD4Q9H223 541 aa17.11■□□□□ 0.33
DDX49-201ENST00000247003 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 CASP1P29466 404 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 EIF6P56537 245 aaKnown RBP17.1■□□□□ 0.33
DDX49-201ENST00000247003 STRIP1Q5VSL9 837 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 ZDHHC15Q96MV8 337 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 BLZF1Q9H2G9 400 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 PSDA5PKW4 1024 aaPredicted RBP17.1■□□□□ 0.33
DDX49-201ENST00000247003 MYL1P05976 194 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 ADCY7P51828 1080 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 RBM5P52756 815 aaKnown RBP eCLIP17.1■□□□□ 0.33
DDX49-201ENST00000247003 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
DDX49-201ENST00000247003 FILIP1LQ4L180 1135 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 GPATCH4Q5T3I0 446 aaKnown RBP17.1■□□□□ 0.33
DDX49-201ENST00000247003 PPP1R18Q6NYC8 613 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms