RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 VAT1LQ9HCJ6 419 aa19.67■□□□□ 0.74
LRFN3-201ENST00000246529 GDAQ9Y2T3 454 aa19.67■□□□□ 0.74
LRFN3-201ENST00000246529 SPATA31A6Q5VVP1 1343 aa19.67■□□□□ 0.74
LRFN3-201ENST00000246529 GTPBP6O43824 516 aaPredicted RBP19.67■□□□□ 0.74
LRFN3-201ENST00000246529 ADRA2BP18089 450 aa19.67■□□□□ 0.74
LRFN3-201ENST00000246529 LONP1P36776 959 aaKnown RBP19.67■□□□□ 0.74
LRFN3-201ENST00000246529 CCT6AP40227 531 aaKnown RBP19.67■□□□□ 0.74
LRFN3-201ENST00000246529 STAT6P42226 847 aa19.67■□□□□ 0.74
LRFN3-201ENST00000246529 ARL6IP4Q66PJ3 421 aaKnown RBP19.67■□□□□ 0.74
LRFN3-201ENST00000246529 ERO1AQ96HE7 468 aa19.67■□□□□ 0.74
LRFN3-201ENST00000246529 L2HGDHQ9H9P8 463 aa19.67■□□□□ 0.74
LRFN3-201ENST00000246529 ADD3Q9UEY8 706 aaKnown RBP19.67■□□□□ 0.74
LRFN3-201ENST00000246529 NAV1Q8NEY1 1877 aa19.66■□□□□ 0.74
LRFN3-201ENST00000246529 RIMBP2O15034 1052 aa19.66■□□□□ 0.74
LRFN3-201ENST00000246529 CCDC178Q5BJE1 867 aa19.66■□□□□ 0.74
LRFN3-201ENST00000246529 CEP95Q96GE4 821 aa19.66■□□□□ 0.74
LRFN3-201ENST00000246529 RBL2Q08999 1139 aa19.66■□□□□ 0.74
LRFN3-201ENST00000246529 CCDC93Q567U6 631 aa19.66■□□□□ 0.74
LRFN3-201ENST00000246529 DTHD1Q6ZMT9 781 aa19.66■□□□□ 0.74
LRFN3-201ENST00000246529 CREBRFQ8IUR6 639 aa19.66■□□□□ 0.74
LRFN3-201ENST00000246529 IGSF22Q8N9C0 903 aa19.66■□□□□ 0.74
LRFN3-201ENST00000246529 F8W031 263 aaPredicted RBP19.65■□□□□ 0.74
LRFN3-201ENST00000246529 CCP110O43303 1012 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 RPN1P04843 607 aaKnown RBP19.65■□□□□ 0.74
LRFN3-201ENST00000246529 NAALADL2Q58DX5 795 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 RASSF8Q8NHQ8 419 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 STX10O60499 249 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 NAPAP54920 295 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 GTF2IP78347 998 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 PICALMQ13492 652 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 CT47A1Q5JQC4 288 aaPredicted RBP19.65■□□□□ 0.74
LRFN3-201ENST00000246529 CCDC148Q8NFR7 591 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 NEDD1Q8NHV4 660 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 UBA5Q9GZZ9 404 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 DISC1Q9NRI5 854 aa19.65■□□□□ 0.74
LRFN3-201ENST00000246529 SOWAHDA6NJG2 315 aa19.64■□□□□ 0.74
LRFN3-201ENST00000246529 AKR1B15C9JRZ8 316 aaPredicted RBP19.64■□□□□ 0.74
LRFN3-201ENST00000246529 ZSCAN12O43309 604 aa19.64■□□□□ 0.74
LRFN3-201ENST00000246529 PARP1P09874 1014 aaKnown RBP19.64■□□□□ 0.74
LRFN3-201ENST00000246529 TXLNAP40222 546 aa19.64■□□□□ 0.74
LRFN3-201ENST00000246529 FCHSD1Q86WN1 690 aa19.64■□□□□ 0.74
LRFN3-201ENST00000246529 LRRC15Q8TF66 581 aa19.64■□□□□ 0.74
LRFN3-201ENST00000246529 PRDM10Q9NQV6 1147 aa19.64■□□□□ 0.74
LRFN3-201ENST00000246529 PBX1P40424 430 aa19.64■□□□□ 0.73
LRFN3-201ENST00000246529 DAGLBQ8NCG7 672 aa19.64■□□□□ 0.73
LRFN3-201ENST00000246529 NELFBQ8WX92 580 aa19.64■□□□□ 0.73
LRFN3-201ENST00000246529 ZNF287Q9HBT7 754 aa19.64■□□□□ 0.73
LRFN3-201ENST00000246529 DDX60LQ5H9U9 1706 aaKnown RBP19.64■□□□□ 0.73
LRFN3-201ENST00000246529 USP17L5A8MUK1 530 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 BBOX1O75936 387 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 ERCC6LQ2NKX8 1250 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 KMT5BQ4FZB7 885 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 CLEC10AQ8IUN9 316 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 CGNQ9P2M7 1197 aaKnown RBP19.63■□□□□ 0.73
LRFN3-201ENST00000246529 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.63■□□□□ 0.73
LRFN3-201ENST00000246529 PHLPP2Q6ZVD8 1323 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 PRCPP42785 496 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 PAK1Q13153 545 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 KRT31Q15323 416 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 ZNF658Q5TYW1 1059 aaPredicted RBP19.63■□□□□ 0.73
LRFN3-201ENST00000246529 PIGSQ96S52 555 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 MXD3Q9BW11 206 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 VPS16Q9H269 839 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 DAGLAQ9Y4D2 1042 aa19.63■□□□□ 0.73
LRFN3-201ENST00000246529 FRMPD2Q68DX3 1309 aaPredicted RBP19.63■□□□□ 0.73
LRFN3-201ENST00000246529 SMCO2A6NFE2 343 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 POLRMTO00411 1230 aaKnown RBP19.62■□□□□ 0.73
LRFN3-201ENST00000246529 IGSF3O75054 1194 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 URI1O94763 535 aaPredicted RBP19.62■□□□□ 0.73
LRFN3-201ENST00000246529 EIF6P56537 245 aaKnown RBP19.62■□□□□ 0.73
LRFN3-201ENST00000246529 LETM2Q2VYF4 491 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 PPFIBP1Q86W92 1011 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 WDR24Q96S15 920 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 SPZ1Q9BXG8 430 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 TAB2Q9NYJ8 693 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 RWDD2AQ9UIY3 292 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 A0A0U1RQJ8 604 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 TRIM49BA6NDI0 452 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 ONECUT3O60422 494 aaPredicted RBP19.62■□□□□ 0.73
LRFN3-201ENST00000246529 NT5C2P49902 561 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 ATRIPQ8WXE1 791 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 PYM1Q9BRP8 204 aaKnown RBP19.62■□□□□ 0.73
LRFN3-201ENST00000246529 PODXL2Q9NZ53 605 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 GAKO14976 1311 aa19.62■□□□□ 0.73
LRFN3-201ENST00000246529 GOLGB1Q14789 3259 aaKnown RBP19.62■□□□□ 0.73
LRFN3-201ENST00000246529 TRIM37O94972 964 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 CASP14P31944 242 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 UBA7P41226 1012 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 FBXO38Q6PIJ6 1188 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 RAD9BQ6WBX8 426 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 PKNOX2Q96KN3 472 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 LZTS2Q9BRK4 669 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 ZMYND12Q9H0C1 365 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 MRPL44Q9H9J2 332 aaKnown RBP19.61■□□□□ 0.73
LRFN3-201ENST00000246529 CCNT1O60563 726 aaKnown RBP19.61■□□□□ 0.73
LRFN3-201ENST00000246529 PLCG2P16885 1265 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 FXR1P51114 621 aaKnown RBP eCLIP19.61■□□□□ 0.73
LRFN3-201ENST00000246529 GNG11P61952 73 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 FILIP1LQ4L180 1135 aa19.61■□□□□ 0.73
LRFN3-201ENST00000246529 GALNT17Q6IS24 598 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms