RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PPP2R3AQ06190 1150 aa24.43■■□□□ 1.5
SH2D3A-201ENST00000245908 SLC35G1Q2M3R5 365 aa24.43■■□□□ 1.5
SH2D3A-201ENST00000245908 RASGRP2Q7LDG7 609 aa24.43■■□□□ 1.5
SH2D3A-201ENST00000245908 CCDC148Q8NFR7 591 aa24.43■■□□□ 1.5
SH2D3A-201ENST00000245908 MKNK2Q9HBH9 465 aa24.43■■□□□ 1.5
SH2D3A-201ENST00000245908 DISC1Q9NRI5 854 aa24.43■■□□□ 1.5
SH2D3A-201ENST00000245908 RTCBQ9Y3I0 505 aaKnown RBP24.43■■□□□ 1.5
SH2D3A-201ENST00000245908 FHOD1Q9Y613 1164 aa24.43■■□□□ 1.5
SH2D3A-201ENST00000245908 CCDC194A0A1B0GVG4 234 aa24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 CCT6AP40227 531 aaKnown RBP24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 FXR1P51114 621 aaKnown RBP eCLIP24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 COPB1P53618 953 aaKnown RBP24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 AMOTL1Q8IY63 956 aa24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 RASGRP4Q8TDF6 673 aa24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 PCDHA6Q9UN73 950 aa24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 PCDHA8Q9Y5H6 950 aa24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 COBLO75128 1261 aa24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 ZRANB2O95218 330 aaKnown RBP eCLIP24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 WWC2Q6AWC2 1192 aa24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 CREBRFQ8IUR6 639 aa24.42■■□□□ 1.5
SH2D3A-201ENST00000245908 NHSQ6T4R5 1651 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 USP17L3A6NCW0 530 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 USP17L4A6NCW7 530 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 N4BP3O15049 544 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 BAG3O95817 575 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 VPS72Q15906 364 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 TCP11X2Q5H9J9 407 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 DTHD1Q6ZMT9 781 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 RSRC2Q7L4I2 434 aaKnown RBP24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 USP17L1Q7RTZ2 530 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 ANKRD20A12PQ8NF67 263 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 CCDC12Q8WUD4 166 aaPredicted RBP24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 ARHGEF1Q92888 912 aaKnown RBP24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 ANKIB1Q9P2G1 1089 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 TSPY3P0CV98 308 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 TSPY8P0CW00 308 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 CDC25AP30304 524 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 GRAPQ13588 217 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 AMIGO3Q86WK7 504 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 GRAPLQ8TC17 118 aaPredicted RBP24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 MYH8P13535 1937 aa24.41■■□□□ 1.5
SH2D3A-201ENST00000245908 TAF1LQ8IZX4 1826 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 KCNJ18B7U540 433 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 CYTH3O43739 400 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 TRIM14Q14142 442 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 KCNJ12Q14500 433 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 NAALADL2Q58DX5 795 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 TMCO3Q6UWJ1 677 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 BARHL2Q9NY43 387 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 GDAQ9Y2T3 454 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 CDK5RAP2Q96SN8 1893 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 PALM3A6NDB9 673 aaPredicted RBP24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 STXBP3O00186 592 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 PRCPP42785 496 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 DIXDC1Q155Q3 683 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 ZNF444Q8N0Y2 327 aaPredicted RBP24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 GPR161Q8N6U8 529 aaKnown RBP24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 TMEM60Q9H2L4 133 aa24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 CCNL1Q9UK58 526 aaPredicted RBP24.4■■□□□ 1.5
SH2D3A-201ENST00000245908 PNMA6AP0CW24 399 aaPredicted RBP24.39■■□□□ 1.5
SH2D3A-201ENST00000245908 GRIK5Q16478 980 aa24.39■■□□□ 1.5
SH2D3A-201ENST00000245908 TMTC1Q8IUR5 882 aa24.39■■□□□ 1.5
SH2D3A-201ENST00000245908 IRX2Q9BZI1 471 aaPredicted RBP24.39■■□□□ 1.5
SH2D3A-201ENST00000245908 VPS16Q9H269 839 aa24.39■■□□□ 1.5
SH2D3A-201ENST00000245908 LZTFL1Q9NQ48 299 aa24.39■■□□□ 1.5
SH2D3A-201ENST00000245908 TAB2Q9NYJ8 693 aa24.39■■□□□ 1.5
SH2D3A-201ENST00000245908 H7C1D1 291 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 LAD1O00515 517 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 MYL1P05976 194 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 LDHCP07864 332 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 KCNB1Q14721 858 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 ADSSL1Q8N142 457 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 TGFBRAP1Q8WUH2 860 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 TMEM47Q9BQJ4 181 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 LZTS2Q9BRK4 669 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 CCSER1Q9C0I3 900 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 MYH1P12882 1939 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 KIF5CO60282 957 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 RASA1P20936 1047 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 C15orf52Q6ZUT6 534 aaKnown RBP24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 HEATR3Q7Z4Q2 680 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 ZNF804AQ7Z570 1209 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 SLC51AQ86UW1 340 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 ABHD10Q9NUJ1 306 aa24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 TTF2Q9UNY4 1162 aaKnown RBP24.38■■□□□ 1.49
SH2D3A-201ENST00000245908 PRPHP41219 470 aa24.37■■□□□ 1.49
SH2D3A-201ENST00000245908 SEMA3FQ13275 785 aa24.37■■□□□ 1.49
SH2D3A-201ENST00000245908 INF2Q27J81 1249 aa24.37■■□□□ 1.49
SH2D3A-201ENST00000245908 SLC44A5Q8NCS7 719 aa24.37■■□□□ 1.49
SH2D3A-201ENST00000245908 DDX60LQ5H9U9 1706 aaKnown RBP24.37■■□□□ 1.49
SH2D3A-201ENST00000245908 A0A0U1RQJ8 604 aa24.37■■□□□ 1.49
SH2D3A-201ENST00000245908 ATRIPQ8WXE1 791 aa24.37■■□□□ 1.49
SH2D3A-201ENST00000245908 RABGGTAQ92696 567 aa24.37■■□□□ 1.49
SH2D3A-201ENST00000245908 ERVK-24P63145 666 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 RTFDC1Q9BY42 306 aaPredicted RBP24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 LY75O60449 1722 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 PP2D1A8MPX8 630 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 ATP8B1O43520 1251 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 KLRC4O43908 158 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 NFIXQ14938 502 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms