RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 NAPAP54920 295 aa20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 CCDC73Q6ZRK6 1079 aa20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 PIK3AP1Q6ZUJ8 805 aa20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 BLIDQ8IZY5 108 aa20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 CCDC148Q8NFR7 591 aa20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 MRPS27Q92552 414 aaKnown RBP20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 PCDHA4Q9UN74 947 aa20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 SLC1A4P43007 532 aa20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 AXDND1Q5T1B0 1012 aaPredicted RBP20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 GPATCH4Q5T3I0 446 aaKnown RBP20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 ADGRF4Q8IZF3 695 aa20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 A0A1W2PQ27 194 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 A0A1W2PQ64 194 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 A0A1W2PQD8 194 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 WNT7AO00755 349 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 PPP6R2O75170 966 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 FAM160A1Q05DH4 1040 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 TNFAIP1Q13829 316 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 CLIC6Q96NY7 704 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 JMJD4Q9H9V9 463 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 ZBTB21Q9ULJ3 1066 aa20.56■□□□□ 0.88
KLHDC3-201ENST00000244670 A0A1W2PRG0 241 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 F5H6K3 240 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 H7C1D1 291 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 TBC1D12O60347 775 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 CCDC192P0DO97 292 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 KLRC3Q07444 240 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 JMYQ8N9B5 988 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 TEPSINQ96N21 525 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 NUP88Q99567 741 aaPredicted RBP20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 YBX3P16989 372 aaKnown RBP eCLIP20.55■□□□□ 0.881e-7■■□□□ 14.3
KLHDC3-201ENST00000244670 ECE1P42892 770 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 TYRO3Q06418 890 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 TRPM4Q8TD43 1214 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 DCAF4Q8WV16 495 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 PDLIM2Q96JY6 352 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 NOL7Q9UMY1 257 aaKnown RBP20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 MRVI1Q9Y6F6 885 aa20.55■□□□□ 0.88
KLHDC3-201ENST00000244670 TRIM75PA6NK02 468 aa20.54■□□□□ 0.88
KLHDC3-201ENST00000244670 USP17L10C9JJH3 530 aa20.54■□□□□ 0.88
KLHDC3-201ENST00000244670 NDUFB10O96000 172 aa20.54■□□□□ 0.88
KLHDC3-201ENST00000244670 NDUFA8P51970 172 aa20.54■□□□□ 0.88
KLHDC3-201ENST00000244670 FMR1NBQ8N0W7 255 aaPredicted RBP20.54■□□□□ 0.88
KLHDC3-201ENST00000244670 ACER1Q8TDN7 264 aa20.54■□□□□ 0.88
KLHDC3-201ENST00000244670 COA7Q96BR5 231 aa20.54■□□□□ 0.88
KLHDC3-201ENST00000244670 SPICE1Q8N0Z3 855 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 GPC2Q8N158 579 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 GMCL1P1Q8NEA9 526 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 RRAGDQ9NQL2 400 aaPredicted RBP20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 GPRC5DQ9NZD1 345 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 PCDHA6Q9UN73 950 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 PCDHA8Q9Y5H6 950 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 ATAD5Q96QE3 1844 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 SMCO2A6NFE2 343 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 ZNF174Q15697 407 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 TTC38Q5R3I4 469 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 CCDC84Q86UT8 332 aaPredicted RBP20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 DAGLBQ8NCG7 672 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 CCDC12Q8WUD4 166 aaPredicted RBP20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 DEFB129Q9H1M3 183 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 RNF181Q9P0P0 153 aa20.53■□□□□ 0.88
KLHDC3-201ENST00000244670 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 M0R2N6 131 aa20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 CAP2P40123 477 aa20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 EPS15P42566 896 aa20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 GRIN1Q05586 938 aa20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 ANGEL2Q5VTE6 544 aaKnown RBP20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 SHC4Q6S5L8 630 aa20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 KRI1Q8N9T8 703 aaKnown RBP20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 ZMYND12Q9H0C1 365 aa20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 ARHGEF10LQ9HCE6 1279 aa20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 CEP131Q9UPN4 1083 aa20.52■□□□□ 0.88
KLHDC3-201ENST00000244670 PNMA6FA0A0J9YX94 578 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 CCDC194A0A1B0GVG4 234 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 KINO60870 393 aaKnown RBP20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 PPP1R11O60927 126 aaPredicted RBP20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 PFKFB1P16118 471 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 CMA1P23946 247 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 UVSSAQ2YD98 709 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 C6orf50Q9HD87 102 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 CUTAO60888 179 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 DDNO94850 711 aaPredicted RBP20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 MAP3K10Q02779 954 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 SPECC1Q5M775 1068 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 GALNT17Q6IS24 598 aa20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 FBXO2Q9UK22 296 aaPredicted RBP20.51■□□□□ 0.87
KLHDC3-201ENST00000244670 ZBTB5O15062 677 aa20.5■□□□□ 0.87
KLHDC3-201ENST00000244670 IKQ13123 557 aaPredicted RBP20.5■□□□□ 0.87
KLHDC3-201ENST00000244670 ZYXQ15942 572 aaKnown RBP20.5■□□□□ 0.87
KLHDC3-201ENST00000244670 KIAA1755Q5JYT7 1200 aa20.5■□□□□ 0.87
KLHDC3-201ENST00000244670 NBPF12Q5TAG4 269 aaPredicted RBP20.5■□□□□ 0.87
KLHDC3-201ENST00000244670 PRAMEF18Q5VWM3 479 aa20.5■□□□□ 0.87
KLHDC3-201ENST00000244670 GMCL1Q96IK5 515 aa20.5■□□□□ 0.87
KLHDC3-201ENST00000244670 PHF20L1A8MW92 1017 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 TMEM232C9JQI7 657 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 hCG_1984214I3L0E3 225 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 BMP3P12645 472 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 GNA11P29992 359 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 SNAP25P60880 206 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms