RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 PDE2AO00408 941 aaPredicted RBP20.88■□□□□ 0.93
CHPF-201ENST00000243776 SYF2O95926 243 aaKnown RBP20.88■□□□□ 0.93
CHPF-201ENST00000243776 ZNF658Q5TYW1 1059 aaPredicted RBP20.88■□□□□ 0.93
CHPF-201ENST00000243776 CADPS2Q86UW7 1296 aa20.88■□□□□ 0.93
CHPF-201ENST00000243776 MB21D1Q8N884 522 aa20.88■□□□□ 0.93
CHPF-201ENST00000243776 SMARCAL1Q9NZC9 954 aa20.88■□□□□ 0.93
CHPF-201ENST00000243776 ITIH6Q6UXX5 1313 aa20.88■□□□□ 0.93
CHPF-201ENST00000243776 SEMA3EO15041 775 aa20.88■□□□□ 0.93
CHPF-201ENST00000243776 IGHMBP2P38935 993 aaKnown RBP20.88■□□□□ 0.93
CHPF-201ENST00000243776 TMTC3Q6ZXV5 915 aa20.88■□□□□ 0.93
CHPF-201ENST00000243776 KRT26Q7Z3Y9 468 aa20.88■□□□□ 0.93
CHPF-201ENST00000243776 FAM71BQ8TC56 605 aa20.88■□□□□ 0.93
CHPF-201ENST00000243776 LRRC10BA6NIK2 292 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 USP14P54578 494 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 TRAPPC11Q7Z392 1133 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 CTCFLQ8NI51 663 aaPredicted RBP20.87■□□□□ 0.93
CHPF-201ENST00000243776 HPS3Q969F9 1004 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 JAKMIP2Q96AA8 810 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 GBP3Q9H0R5 595 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 GGCXP38435 758 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 EZH2Q15910 746 aaKnown RBP20.87■□□□□ 0.93
CHPF-201ENST00000243776 DNAJC21Q5F1R6 531 aaKnown RBP20.87■□□□□ 0.93
CHPF-201ENST00000243776 GOLGA6L1Q8N7Z2 621 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 EHD4Q9H223 541 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 POLD4Q9HCU8 107 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 FAM205AQ6ZU69 1335 aa20.87■□□□□ 0.93
CHPF-201ENST00000243776 TRIM21P19474 475 aaKnown RBP20.86■□□□□ 0.93
CHPF-201ENST00000243776 BRINP3Q76B58 766 aa20.86■□□□□ 0.93
CHPF-201ENST00000243776 PLEKP08567 350 aaPredicted RBP20.86■□□□□ 0.93
CHPF-201ENST00000243776 PPARDQ03181 441 aa20.86■□□□□ 0.93
CHPF-201ENST00000243776 TSPYL1Q9H0U9 437 aa20.86■□□□□ 0.93
CHPF-201ENST00000243776 CNTNAP5Q8WYK1 1306 aa20.86■□□□□ 0.93
CHPF-201ENST00000243776 SCG2P13521 617 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 CXCR5P32302 372 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 SPAG1Q07617 926 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 NID2Q14112 1375 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 CTR9Q6PD62 1173 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 UBR2Q8IWV8 1755 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 TMEM60Q9H2L4 133 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 EHD2Q9NZN4 543 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 EIF3CLB5ME19 914 aaKnown RBP20.85■□□□□ 0.93
CHPF-201ENST00000243776 FECHP22830 423 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 AFAP1L1Q8TED9 768 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 HDAC7Q8WUI4 952 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 EIF3CQ99613 913 aaKnown RBP20.85■□□□□ 0.93
CHPF-201ENST00000243776 HPCAL4Q9UM19 191 aa20.85■□□□□ 0.93
CHPF-201ENST00000243776 IDEP14735 1019 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 SLC7A5Q01650 507 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 STIM1Q13586 685 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 TUBB2AQ13885 445 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 ZNF34Q8IZ26 560 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 RIOK1Q9BRS2 568 aaKnown RBP20.84■□□□□ 0.93
CHPF-201ENST00000243776 TUBB2BQ9BVA1 445 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 CPVLQ9H3G5 476 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 BAZ2AQ9UIF9 1905 aaKnown RBP20.84■□□□□ 0.93
CHPF-201ENST00000243776 IVLP07476 585 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 DNA2P51530 1060 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 ZNF384Q8TF68 577 aa20.84■□□□□ 0.93
CHPF-201ENST00000243776 COL5A2P05997 1499 aaPredicted RBP20.84■□□□□ 0.93
CHPF-201ENST00000243776 LRRC15Q8TF66 581 aa20.83■□□□□ 0.93
CHPF-201ENST00000243776 MAGEC2Q9UBF1 373 aaPredicted RBP20.83■□□□□ 0.93
CHPF-201ENST00000243776 INF2Q27J81 1249 aa20.83■□□□□ 0.93
CHPF-201ENST00000243776 CT47A1Q5JQC4 288 aaPredicted RBP20.83■□□□□ 0.93
CHPF-201ENST00000243776 ADSSL1Q8N142 457 aa20.83■□□□□ 0.93
CHPF-201ENST00000243776 STAG2Q8N3U4 1231 aa20.83■□□□□ 0.93
CHPF-201ENST00000243776 ANKRD13CQ8N6S4 541 aa20.83■□□□□ 0.93
CHPF-201ENST00000243776 SMARCC1Q92922 1105 aaPredicted RBP20.83■□□□□ 0.93
CHPF-201ENST00000243776 LGALS16A8MUM7 142 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 BMP15O95972 392 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 SLC20A2Q08357 652 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 TBC1D8BQ0IIM8 1120 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 NAALADL2Q58DX5 795 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 CCDC178Q5BJE1 867 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 SMIM5Q71RC9 77 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 CRACR2AQ9BSW2 395 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 ACBD3Q9H3P7 528 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 HAUS4Q9H6D7 363 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 NHEJ1Q9H9Q4 299 aaPredicted RBP20.83■□□□□ 0.92
CHPF-201ENST00000243776 MYO1AQ9UBC5 1043 aa20.83■□□□□ 0.92
CHPF-201ENST00000243776 NIP7Q9Y221 180 aaKnown RBP eCLIP20.83■□□□□ 0.924e-6■□□□□ 9.7
CHPF-201ENST00000243776 H7C1D1 291 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 KLRK1P26718 216 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 CSGALNACT2Q8N6G5 542 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 PSMD14O00487 310 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 ATP2B2Q01814 1243 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 KCTD19Q17RG1 926 aaPredicted RBP20.82■□□□□ 0.92
CHPF-201ENST00000243776 TYW1BQ6NUM6 668 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 WDR93Q6P2C0 686 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 RRP36Q96EU6 259 aaKnown RBP20.82■□□□□ 0.92
CHPF-201ENST00000243776 TUBGCP2Q9BSJ2 902 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 SELENOOQ9BVL4 669 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 LRWD1Q9UFC0 647 aa20.82■□□□□ 0.92
CHPF-201ENST00000243776 TSPY2A6NKD2 308 aa20.81■□□□□ 0.92
CHPF-201ENST00000243776 UBA7P41226 1012 aa20.81■□□□□ 0.92
CHPF-201ENST00000243776 MLXIPQ9HAP2 919 aa20.81■□□□□ 0.92
CHPF-201ENST00000243776 RBM28Q9NW13 759 aaKnown RBP20.81■□□□□ 0.92
CHPF-201ENST00000243776 TRIM14Q14142 442 aa20.81■□□□□ 0.92
CHPF-201ENST00000243776 CCDC96Q2M329 555 aa20.81■□□□□ 0.92
CHPF-201ENST00000243776 CCDC152Q4G0S7 254 aa20.81■□□□□ 0.92
CHPF-201ENST00000243776 PACS2Q86VP3 889 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms